Query= MSMg01no097_k04.b1 MSMg01no097_k04.b1 CHROMAT_FILE:
MSMg01no097_k04.b1 PHD_FILE: MSMg01no097_k04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:27 2005
(341 letters)
>mm_chr12_73126635_73127378
Length = 744
Score = 613 bits (317), Expect = e-180
Identities = 335/343 (97%), Gaps = 7/343 (2%)
Strand = Plus / Minus
Query: 4 gaattcatttgatttc---ctattctcattc-tagtttccctgtctg-aaattggagtag 58
|||||||||||| || |||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 544 gaattcatttga--tctaactattctcattcatagtttccctgtctgaaaattggagtag 487
Query: 59 ttgcctctggaggtccttcagagacagtgagggtttcaggtgctcaatgctgatacccag 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttgcctctggaggtccttcagagacagtgagggtttcaggtgctcaatgctgatacccag 427
Query: 119 ggagctggacacattataatctccatcctgtagtctcaggtcctggctttcagataacca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ggagctggacacattataatctccatcctgtagtctcaggtcctggctttcagataacca 367
Query: 179 tgtggggagatataggaatactttggtacaacttacaggacatgtctccctaactggaca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgtggggagatataggaatactttggtacaacttacaggacatgtctccctaactggaca 307
Query: 239 tctttcttggactgattataaacttttaaaatgtataactttaaagccctgatgcaatgg 298
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 306 tctttcttggactgattataaacttttaaaatgtagaactttaaagccctgatgcaatgg 247
Query: 299 gatatgagaaaagtaactctgatactaaagttgggtccatcaa 341
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gatatgagaaaagtaactctgatactaaagttgggtccatcaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 744
Length adjustment: 9
Effective length of query: 332
Effective length of database: 735
Effective search space: 244020
Effective search space used: 244020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no097_k04.g1 MSMg01no097_k04.g1 CHROMAT_FILE:
MSMg01no097_k04.g1 PHD_FILE: MSMg01no097_k04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:27 2005
(201 letters)
>mm_chr12_72983895_72984495
Length = 601
Score = 381 bits (197), Expect = e-110
Identities = 200/201 (99%)
Strand = Plus / Plus
Query: 1 cagtggctctgggttctgcaaggaagggggttacaatagattttctgtcttggtgatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtggctctgggttctgcaaggaagggggttacaatagattttctgtcttggtgatcaa 260
Query: 61 tcgacagatccttttccaggcaggggagatgccttcagacttaggaaagggatagtaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcgacagatccttttccaggcaggggagatgccttcagacttaggaaagggatagtaagt 320
Query: 121 ggatgaggtcagtgactggggaccctgtgggatgatagcatctgaattgccgatgtcagt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggatgaggtcagtgactggggaccctgtgggatgatagcatctgaattgccgatgtcaga 380
Query: 181 gtcctggtagtgattcaactg 201
|||||||||||||||||||||
Sbjct: 381 gtcctggtagtgattcaactg 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 601
Length adjustment: 8
Effective length of query: 193
Effective length of database: 593
Effective search space: 114449
Effective search space used: 114449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
