Query= MSMg01no097_p14.b1 MSMg01no097_p14.b1 CHROMAT_FILE:
MSMg01no097_p14.b1 PHD_FILE: MSMg01no097_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:55 2005
(242 letters)
>mm_chr12_35138368_35139009
Length = 642
Score = 418 bits (216), Expect = e-121
Identities = 235/242 (97%), Gaps = 2/242 (0%)
Strand = Plus / Minus
Query: 1 aaatgactatgggtttctattaagttttatctgtcaagataggtgataaatattctggat 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 301 aaatgactatgggtttctattaagttttatctgccaagataggtgataaatattttggat 242
Query: 61 ttaggtcatactaactctttaactttccattctgaccctgaacataattgaatgtaacta 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttaggtcatactaactctttaacattccattctgaccctgaacataattgaatgtaacta 182
Query: 121 gatgtgttccaataaaactttatttataaacaaaatctgcattttatataatctccatgt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 181 gatgtgttccaataaaactttatttataaacaaaatctgcattttatataatttccatgt 122
Query: 181 tatgaaatagtctctctctctctctccctctccctctccctctctctctctctctctctc 240
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 121 tatgaaatagtctctctctctctctctctctc--tctccctctctctctctctctctctc 64
Query: 241 tc 242
||
Sbjct: 63 tc 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no097_p14.g1 MSMg01no097_p14.g1 CHROMAT_FILE:
MSMg01no097_p14.g1 PHD_FILE: MSMg01no097_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:55 2005
(364 letters)
>mm_chr12_34981419_34982182
Length = 764
Score = 673 bits (348), Expect = 0.0
Identities = 360/364 (98%)
Strand = Plus / Plus
Query: 1 acagcaattctgatttcataaaatatcaaagctggaagcaatctgagcaaatactctacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagcaattctgatttcataaaatatcaaagctggaagcaatctgagcaaatactctacc 260
Query: 61 caacaccttcatgtagacatgaaagaaccaatcaccagcaaggttaaatgatgtaaggtg 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 caacaccttcatgtagacatgaaagaaacaatcaccagcaaggttaaatgatgtaaggtg 320
Query: 121 cacagataattaaaggcagaatcaaggttaaatataatagtcaacaatcactttttgtgg 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 cacagataattaaaggcagaatcaaggttaaatataatagtgaacaatcactttttgtgg 380
Query: 181 actctattttggttaatttaaaaaacaaacatttggtttgtagctcactctattattttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actctattttggttaatttaaaaaacaaacatttggtttgtagctcactctattattttg 440
Query: 241 gaaagaaataatccttttaatgttttaaaatgatacttttttccctggatatcattgcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 441 gaaagaaataatccttttaatgttttaaaatgatacttttttccctggatatcattgtta 500
Query: 301 ttccataaatataaaattacctagtctgtttggtaaggaaagttgacttcatctgcttgt 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttcataaatataaaattacctagtctgtttggtaaggaaagttgacttcatctgcttgt 560
Query: 361 cagc 364
||||
Sbjct: 561 cagc 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
