Query= MSMg01no100_i09.b1 MSMg01no100_i09.b1 CHROMAT_FILE:
MSMg01no100_i09.b1 PHD_FILE: MSMg01no100_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:58:24 2005
(524 letters)
>mm_chr12_120106778_120107701
Length = 924
Score = 982 bits (508), Expect = 0.0
Identities = 517/520 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaaggagacaaccttttcagaacctggttgcccagcttcaatcctctcctcctt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaggagaaaaccttttcagaacctggttgcccagcttcaatcctctcctcctt 264
Query: 65 gccaccactgggccttcgtttcccccaacctgaccttagtcttcatgataccatacactc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gccaccactgggccttcgtttcccccaacctgaccttagtcttcatgataccatacactc 324
Query: 125 ccatttgacatgaaagcagaggttgtttaccttctcactctcattatcaagggctgaagt 184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccatttgatatgaaagcagaggttgtttaccttctcactctcattatcaagggctgaagt 384
Query: 185 ggcctcatccagcagtaaaatttttggcttccggagaagagcccttgcaatagccagtct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggcctcatccagcagtaaaatttttggcttccggagaagagcccttgcaatagccagtct 444
Query: 245 ttgtttctggccgccagaaagctgcacgcctcttagtcccactagggtgttgtatttctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgtttctggccgccagaaagctgcacgcctcttagtcccactagggtgttgtatttctg 504
Query: 305 tgtcagaaacatgcaggctaacaaagcacattagcaactgtgggagagagacatctaaag 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtcagaaacatgcaggttaacaaagcacattagcaactgtgggagagagacatctaaag 564
Query: 365 agttcacatttcaatactcttgaaaggtgtgtcccgatacacctgaaatctatttttagt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agttcacatttcaatactcttgaaaggtgtgtcccgatacacctgaaatctatttttagt 624
Query: 425 cctatgaacaccatggccgttattcatctatgaaggaatttcttctgactttctattctc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctatgaacaccatggccgttattcatctatgaaggaatttcttctgactttctattctc 684
Query: 485 tccctcccttcttttctcttatttttttctttattgagat 524
||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tccctcccttcttttctcttatttttttctttattgagat 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no100_i09.g1 MSMg01no100_i09.g1 CHROMAT_FILE:
MSMg01no100_i09.g1 PHD_FILE: MSMg01no100_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:58:25 2005
(445 letters)
>mm_chr12_120175393_120176237
Length = 845
Score = 551 bits (285), Expect = e-161
Identities = 324/337 (96%), Gaps = 1/337 (0%)
Strand = Plus / Minus
Query: 1 agtgaagcttcactggtaggagaaaaattcaggtaagaatttagatgctgggtagtgaga 60
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 336 agtgaaacttcactggtaggagaaaaattcaggtaagaatttagatgctgggtaatgaga 277
Query: 61 agctactcgggtttcaaattatgtggcagtaaagtactctgtaaagtctcactcgctctg 120
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 276 agctactcgggtttcaaattatgtgacagtaaagtactctgtaaagtctcactccctctg 217
Query: 121 gttctctattggttaatgtcctagcttcctttcctgctgctgtgaaaatctattctgaca 180
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 216 gttctctcttggttaatgtcctagctttctttcctgctgctgtgaaaatctattctgaca 157
Query: 181 agggcaacttgggtatggaagggtttgttttagctcatagtttcaggataaagtccatca 240
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 156 agggcaacttgggtaaggaagggtttgttttagctcatagttccaggataaagtccatca 97
Query: 241 cagcatagaagtcaagggcagagagagaataaatgtgtgcatacatgtattcagctctct 300
||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 96 cagcagaga-gtcaagggcagaaagagaataaatgtgtgcacacatgtattcagctctct 38
Query: 301 tctagcctatacaattcaggatcacctgccaagggaa 337
|||||||||||||| ||||||||||||||||||||||
Sbjct: 37 tctagcctatacaactcaggatcacctgccaagggaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
