Query= MSMg01no102_o21.b1 MSMg01no102_o21.b1 CHROMAT_FILE:
MSMg01no102_o21.b1 PHD_FILE: MSMg01no102_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:40 2005
(104 letters)
>mm_chr12_62773069_62773572
Length = 504
Score = 155 bits (80), Expect = 8e-43
Identities = 98/104 (94%)
Strand = Plus / Plus
Query: 1 caaaagaatataaatcacaattctcattaaacgacaatcacacacttgtaggggaataag 60
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 caaaagaatataaatcaaaattctcattaaacgacaatcacacacttgtagaggaataag 260
Query: 61 gataacacagtataaaaggagctactgcaaagtaaagaggaatt 104
|||||||||||| ||||||| |||||||| |||||| |||||||
Sbjct: 261 gataacacagtagaaaaggacctactgcagagtaaaaaggaatt 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 504
Length adjustment: 8
Effective length of query: 96
Effective length of database: 496
Effective search space: 47616
Effective search space used: 47616
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no102_o21.g1 MSMg01no102_o21.g1 CHROMAT_FILE:
MSMg01no102_o21.g1 PHD_FILE: MSMg01no102_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:40 2005
(426 letters)
>mm_chr12_62943007_62943837
Length = 831
Score = 787 bits (407), Expect = 0.0
Identities = 423/431 (98%), Gaps = 5/431 (1%)
Strand = Plus / Minus
Query: 1 actgagccaacatatgccagtgacaatctcaatcaagagac-----ttttttttttaatg 55
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 631 actgagccaacatatgccggtgacaatctcaatcaagagactttttttttttttttaatg 572
Query: 56 tttagagaaatctctgaagccattccatagacatgatttttctgtgttcctatttattgc 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tttagagaaatctctgaagccattccatagacatgatttttctgtgttcctatttattgc 512
Query: 116 taacttttttctaagatgtaaccaagtacaatttaaagtattattgttttggaaataaag 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 taacttttttctaagatgtaaccaagtacaatttaaagtattattgttttggaaataaag 452
Query: 176 agtgaaactaaaattgtttcctgaaaatgaattataaatatttcaaaccatggtaaaaac 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 agtgaaactaaaattgtttcctgaaaatgaattataaatatttcaaaccatggtaaaaac 392
Query: 236 taaaatggaacacgacatacatagtgtgctctgaatgcagtagaaaatttgcaagagcat 295
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 391 taaaatggaacacgacatacatagtgtgctctgaatgcagcagaaaatttgcaagagcat 332
Query: 296 gtattcataaccaaaatcaatgctgccaataagtcagtgtattgtaaatgttggatatca 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtattcataaccaaaatcaatgctgccaataagtcagtgtattgtaaatgttggatatca 272
Query: 356 atatataaactttataaaatgcaatggaatggatattgatgttctgaagataacattcac 415
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 271 atatataaactttataaaatgcaatggattggatattgatgttctgaagataacattcac 212
Query: 416 tctggtcagga 426
|||||||||||
Sbjct: 211 tctggtcagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 831
Length adjustment: 9
Effective length of query: 417
Effective length of database: 822
Effective search space: 342774
Effective search space used: 342774
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
