Query= MSMg01no103_d22.b1 MSMg01no103_d22.b1 CHROMAT_FILE:
MSMg01no103_d22.b1 PHD_FILE: MSMg01no103_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:06 2005
(284 letters)
>mm_chr12_111392312_111392992
Length = 681
Score = 443 bits (229), Expect = e-129
Identities = 267/281 (95%), Gaps = 3/281 (1%)
Strand = Plus / Plus
Query: 4 ggaattcaaagcatccgttccacgagcatacacgggccttatgaccaggttccctcatgt 63
||||||||||||||| | |||| ||||| |||| |||| |||||||||||||||||||||
Sbjct: 204 ggaattcaaagcatctggtccatgagcacacacaggccctatgaccaggttccctcatgt 263
Query: 64 ttcaaacagtgtgtactctacccaactgaagaactttgaacttctccaggggcacacggt 123
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 264 ttcaaacagtgtgtactctacccagctgaagaactttgaacttctccaggggcacacagt 323
Query: 124 gtccagagccagtgcttcctggatggcctctcagttcctggtcgctactccttgtgacca 183
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtccagagccagtgcttcctggctggcctctcagttcctggtcgctactccttgtgacca 383
Query: 184 caggttacggcctacacagcaaagctagagacaggtcacaaaaacagcaggcgtttattc 243
|||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 384 caggttacggtctacacagcaaagctagagacaggtcacaaaaacatcag---tttattc 440
Query: 244 tcaaaggatttggttttagtcctgccagtatgcaagaggcc 284
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaaaggatttggttttagtcctgccagtatgcaagaggcc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 681
Length adjustment: 9
Effective length of query: 275
Effective length of database: 672
Effective search space: 184800
Effective search space used: 184800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no103_d22.g1 MSMg01no103_d22.g1 CHROMAT_FILE:
MSMg01no103_d22.g1 PHD_FILE: MSMg01no103_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:06 2005
(238 letters)
>mm_chr12_111507906_111508543
Length = 638
Score = 453 bits (234), Expect = e-132
Identities = 237/238 (99%)
Strand = Plus / Minus
Query: 1 tagactcttggagagaccggtcacccattttccctgaatgaatgtcacgttcccaagact 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tagactcttggagagaccggtcacccattttccctgaatgaatgtcacgttcccaagacc 379
Query: 61 ctgtgcagggctgccatggctgggatcctctcatgtcctggagggatcctgggggcacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ctgtgcagggctgccatggctgggatcctctcatgtcctggagggatcctgggggcacct 319
Query: 121 ctgtcctcaggaagggctctttggagaggcaaaaagaacacatgtctacacctccagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctgtcctcaggaagggctctttggagaggcaaaaagaacacatgtctacacctccagatt 259
Query: 181 ctgaaaatggatttctcccagggaaccagagactcagagtgcgttctctcccctgagc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctgaaaatggatttctcccagggaaccagagactcagagtgcgttctctcccctgagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
