XXXXXXXXXXXXXXXXXXXXXXXCTATTTCAAGAGAATCCGCGGAATTCT
ACCAAATATCCAAAGAAGAACTAATAGCAATACTCCTCAAATTATTCTAC
AAAATAGAAACATAAGCAGCATTGCCAAACTCATTTGTGAAATCATAGGT
ACCGTGATACCCAAACTACACAAAGACTCAAAAAAGAATTACAGGCCAAT
GTCCTTCATGAACATATATGCAAAAACATTCAATAAAATGCTTGCAAACT
GAATTCAGGAACACATAAAAACAACTGTCATACAACACTGTTAAGAATGC
TTCATTAGAGAGATGTATTTCTGGCTCAATATATAAAAATCTGTCAGTAT
AATCTACCATATAAACACCTTGAAACAAAAAATCACATGATTATCTCATT
AGATGCTGTAAAGCATTTGACAAAAACCAACCTTTGACAACACCCCTTCA
TGACTAAAAGTATTGAAGAATTCAAGAATACAAACTACATACCTAAACAT
AATACAGGCAATATACAGAAAGCTGATAGCCAGCATCAAATTAAATGAAG
AGTAACTCAAAGCAATTTCACTAAAATCAAGAAAAAGACAAGGCTATCTA
CTCTTTGCATATCTATTCAATATAGTATTTGAAGTTTTAGCTCAAGCAAT
ACACAACTGAAGAAGATACAAATTGGAAAGTAAGAAATCAAAGTATTGCT
ATTTGCAGATGATATGATGGTATACATN

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGCTGCAAACGTCAGAAGTTAGCAAG
GGACTCTTCCTGTAGGCTACTGTCCTCTGCTGTGGCAGTGTTCAGTCATT
TTCAAAGTCAATGTCATGGGACATCAGGAAGAAGACTTTCCAGATCTATT
CATGTTTATATTAAAAAATAACACTGATCAAGTCACACGGACTTGGTTGG
AATGTATCTAGGTATTAATTAATTACCACGTGTTCCATAATTAAAAATTG
TATGTGTGGCATTGATTATACTTTTAGATAAAAGATTGATTTTTCCCTAT
TTATACTTTTTAAATAATCTACTCTCCAGGCTAAATAAATATTTCAAAGA
ATATTATGTAGGAGCTTGGGTAAATAAGGTAGACCTGCTCCTTTATATAC
ATTTTTTTTGTTGAGACAGGGTTTCTCTGTGTATCCCTGGCTGTCCTGGA
GCTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTC
TGCCTCCCAAATCCTGGGTTTAAAAGCATGTGCCACCACTGCCTGGCTAC
ATTATTTTCTTATCAGACATAAAAGATTTGATCATTTAGCTCAGTGGGAC
CATAATATAACCCGTCCATTAGGAAGTATTACCTTTGTCTCACAATACAT
TATAACTTATCTAGAAAAAAATAACA

Query= MSMg01no103_g20.g1 MSMg01no103_g20.g1 CHROMAT_FILE:
MSMg01no103_g20.g1 PHD_FILE: MSMg01no103_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:21 2005
         (542 letters)



>mm_chr12_51469694_51470636
          Length = 943

 Score =  957 bits (495), Expect = 0.0
 Identities = 532/549 (96%), Gaps = 11/549 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgctgcaaacgtcagaagttagcaagggactcttcctgtaggctactgtcctctgctgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 579 ctgctgcaaacgtcagaagttagcaagggactcttcctgtaggctactgtcctttgctgt 520

                                                                       
Query: 61  ggcagtgttcagtcattttcaaagtcaatgtcatgggacatcaggaagaagactttccag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggcagtgttcagtcattttcaaagtcaatgtcatgggacatcaggaagaagactttccag 460

                                                                       
Query: 121 atctattcatgtttatattaaaaaataacactgatcaagtcacacggacttggttggaat 180
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 459 atctattcatgtttatattaaaaaataacactgatcaagtcacatggacttggttggaat 400

                                                                       
Query: 181 gtatctaggtattaattaattaccacgtgttccataattaaaaattgtatgtgtggcatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gtatctaggtattaattaattaccacgtgttccataattaaaaattgtatgtgtggcatt 340

                                                                       
Query: 241 gattatac----ttttagataaaagattga-tttttccctatttatactttttaaataat 295
           ||||||||        |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 339 gattatacaggg----agataaaagattgattttttccctatttatactttttaaataat 284

                                                                       
Query: 296 ctactctccaggctaaataaatatttcaaagaatattatgtaggagcttgggtaaataag 355
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctattctccaggctaaataaatatttcaaagaatattatgtaggagcttgggtaaataag 224

                                                                       
Query: 356 gtagacctgctcctttatataca--ttttttttgttgagacagggtttctctgtgtatcc 413
           |||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||
Sbjct: 223 gtagacctgctcctttatatacattttttttttgttgagacacggtttctctgtgtatcc 164

                                                                       
Query: 414 ctggctgtcctggagctcactctgtagaccaggctggcctcgaactcagaaatccacctg 473
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ctggctgtcctggagctcactctgtagaccaggctggcctcgaactcagaaatccacctg 104

                                                                       
Query: 474 cctctgcctcccaaatcctgggtttaaaagcatgtgccaccactgcctggctacattatt 533
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 103 cctctgcctcccaaatcctgggtttaaaagcatgtgccaccactgcccggctacattatt 44

                    
Query: 534 ttcttatca 542
           |||| ||||
Sbjct: 43  ttctcatca 35


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 943
Length adjustment: 10
Effective length of query: 532
Effective length of database: 933
Effective search space:   496356
Effective search space used:   496356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)