ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAGAATCCGCGGAATTC
AGTGAACATATATCATCATACTGTAACACAGACCATGTTCTAAGTGTTGG
ATTCCATAGATATTGGGTCTCAGAAGAACTTGTAGTACAAATGCACACAA
GGGTCAGCACAAGAAAAACTGTGAGAAATGAAGATAAGATATAGGTCTTG
TAAAGGCTTTGTGTTTAGGAAGTGGTTTGGCATGGGAAAATAAGAAAAAC
ATCTAGGAGACACCATACTTCCTTGGTCATTTGCACCTTTATAATGAACA
CAGGAAAGTATAGTAAGAGATATTAGAGTAAAAAGATCTGCTAATTCTCT
TGGATGGGTCAGTGTATGGTGAGAAATGTGTCCTACGCTAACTATGTCAG
CTTTCATCAAATGACTAGACTTGGCTAATAAAATGTTCTCCGTTTCCAAG
AAAAAGCTTTCAGAGCCTTCACATCACCCCACTGTTCTCTGTTCCTTTTG
CCTGAGGAATGCTATGTTCTCAAAAGCTGCTCCATTAGCTGGATCTGGGA
ATGAGAAGGACAAAGCAAAGCCATGTAATGAAAAGAATGTTGGCAGGAAA
AACACCTCTGCCCAATTAACCCACTAATATTTGGGAGCTATTAAGTTTTG
GCGTTAATAACAGCTAACTTTATTGATAAAGGGAGAGTACATTCTTGACC
ACCGTACCTGTTCTCTCTCATTCT

TGAAGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATGCTGTAGAGATAATTTTAATTGTGAACTT
AAAATACATTTAAATTACCTGCATAATGTCTAGATTGTGAGCATATCTGT
GGGAGGATTGTCTTGACTACATTAGTTGGTGTAGGAAGAACCAACCTAAG
TCAGAGTGTCAGCATTACCTGGGATGGGTCCTAGCTTACTAGTAGAACTT
TGACCTGTGTCTGTTCTCTCTCTGCTCTGGACTTTGCATGTGAATAGTTA
CCACATGTCCTTACTGCCTTGTTTTCTCTGCTATGATGTACTATATGGAA
TTATAAGCTAAAATTAACCCTCTCTCTGCTAAGTACTTTTCTCATAATAT
TTTATCACACAATCATAACTTAAACGAACGCATGGTCCTTTGTGATCTAC
CGTTGAAGTTTTAACTCCTCTCTGCTGTATCCTGTCCGACTTGAATGGAA
TCGTTTTTTTCTTTACCAGTGACTGTCTCACATCCCACCTTATATGTTAT
AGATGGTCCCTCAGCTCTATCTTTTTTTTCTCACGCTTCTGTCCTCTCGT
ACTTTTCCATTCTATTGTTCAATGCCATTCATTGCGCCACAATTTTCTTT
TGGCCGCTTTTAGATCCGATCCTCGCTCTTTTTCCCTTTCTCCACCTTCT
CCCCCTCATTGTCTCCTATATTTATTTTC

Query= MSMg01no104_k20.b1 MSMg01no104_k20.b1 CHROMAT_FILE:
MSMg01no104_k20.b1 PHD_FILE: MSMg01no104_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:01 2005
         (524 letters)



>mm_chr12_96659049_96659974
          Length = 926

 Score =  920 bits (476), Expect = 0.0
 Identities = 507/518 (97%), Gaps = 4/518 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcagtgaacatatatcatcat--actgtaacacagaccatgttctaagtgttggat 63
           ||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||
Sbjct: 722 gaattcagtgaacatatattatcatacactgtaacacagaccatgttctaagtgttggat 663

                                                                       
Query: 64  tccatagatattgggtctcagaagaacttgtagtacaaatgcacacaagggtcagcacaa 123
           |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tccatagatattgggtgtcagcagaacttgtagtacaaatgcacacaagggtcagcacaa 603

                                                                       
Query: 124 gaaaaactgtgagaaatga-agataagatataggtcttgtaaaggctttgtgtttaggaa 182
           ||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||
Sbjct: 602 gaaaaactgtgagaaat-atagataagatataggtcttgtaaaggctttgtgtttatgaa 544

                                                                       
Query: 183 gtggtttggcatgggaaaataagaaaaacatctaggagacaccatacttccttggtcatt 242
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 543 gtggtttggcatgggaaaataagaaaagcatctaggagacaccatacttccttggtcatt 484

                                                                       
Query: 243 tgcacctttataatgaacacaggaaagtatagtaagagatattagagtaaaaagatctgc 302
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggcacctttataatgaacacaggaaagtatagtaagagatattagagtaaaaagatctgc 424

                                                                       
Query: 303 taattctcttggatgggtcagtgtatggtgagaaatgtgtcctacgctaactatgtcagc 362
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 taattctcctggatgggtcagtgtatggtgagaaatgtgtcctacgctaactatgtcagc 364

                                                                       
Query: 363 tttcatcaaatgactagacttggctaataaaatgttctccgtttccaagaaaaagctttc 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tttcatcaaatgactagacttggctaataaaatgttctccgtttccaagaaaaagctttc 304

                                                                       
Query: 423 agagccttcacatcaccccactgttctctgttccttttgcctgaggaatgctatgttctc 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agagccttcacatcaccccactgttctctgttccttttgcctgaggaatgctatgttctc 244

                                                 
Query: 483 aaaagctgctccattagctggatctgggaatgagaagg 520
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaaagctgctccattagctggatctgggaatgagaagg 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 926
Length adjustment: 10
Effective length of query: 514
Effective length of database: 916
Effective search space:   470824
Effective search space used:   470824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)