Query= MSMg01no105_c16.b1 MSMg01no105_c16.b1 CHROMAT_FILE:
MSMg01no105_c16.b1 PHD_FILE: MSMg01no105_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:42 2005
(469 letters)
>mm_chr12_67720621_67721490
Length = 870
Score = 878 bits (454), Expect = 0.0
Identities = 466/470 (99%), Gaps = 1/470 (0%)
Strand = Plus / Minus
Query: 1 cagtctttctcccttgtcttttatgacagcagaggatataccgattctattttaatccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cagtctttctcccttgtcttttatgacagcagaggatataccgattctattttaatccca 611
Query: 61 tagtcatgtttgggttgctatttattcctcctatctccaaatcacattttgttcctactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tagtcatgtttgggttgctatttattcctcctatctccaaatcacattttgttcctactg 551
Query: 121 tctcctgttccatgctctcttacttggcaatgtaaaggcttatcagccctgtgcagatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tctcctgttccatgctctcttacttggcaatgtaaaggcttatcagccctgtgcagatct 491
Query: 181 tccccaaaatctgtatgtgagatattctgctggcttctgcaaaatgtcaagtgagtttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 490 tccccaaaatctgtatgtgagatattctgctggcttctgcaaaatgtcaagcgagtttcc 431
Query: 241 tgatgaattctaatatctgatataactaaaataaaacttatagtaattctcctgagtta- 299
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tgatgaattctaagatctgatataactaaaataaaacttatagtaattctcctgagttat 371
Query: 300 ttttttttctcttctaggaattcgtgttgcagctaccaaggttcctcacatctataacca 359
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttttttttctcttctaggaactcgtgttgcagctaccaaggttcctcacatctataacca 311
Query: 360 agctacactcatcatttgaatttccttaccccagatatacatgtgaaactcagagagcaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agctacactcatcatttgaatttccttaccccagatatacatgtgaaactcagagagcaa 251
Query: 420 attctggaattagaggctttatttaatacatacttttccacattccccat 469
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 attctggaattagaggctttatttaatacatacttttccacattccccat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 870
Length adjustment: 10
Effective length of query: 459
Effective length of database: 860
Effective search space: 394740
Effective search space used: 394740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_c16.g1 MSMg01no105_c16.g1 CHROMAT_FILE:
MSMg01no105_c16.g1 PHD_FILE: MSMg01no105_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:42 2005
(417 letters)
>mm_chr12_67544462_67545278
Length = 817
Score = 764 bits (395), Expect = 0.0
Identities = 410/415 (98%), Gaps = 1/415 (0%)
Strand = Plus / Plus
Query: 1 ttgtgttcacaaaaatatttttggtatttttactagatataggagttacttggcttttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgtgttcacaaaaatatttttggtatttttactagatataggagttacttggcttttat 260
Query: 61 ttatttaacttatatgaaattgttgtgccatttggaaaacaatatttgaaaacaaataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatttaacttatatgaaattgttgtgccatttggaaaacaatatttgaaaacaaataat 320
Query: 121 ttgggtgttgatatctattaataaagtaaaagatcaattaaatataattgacccaggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgggtgttgatatctattaataaagtaaaagatcaattaaatataattgacccaggctg 380
Query: 181 acaaattaacagcatctgagaaaatgctgttactgtgttcctagtactcaggaaaataga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaaattaacagcatctgagaaaatgctgttactgtgttcctagtactcaggaaaataga 440
Query: 241 tctggtttgaaggtggtaaaattactagaggacacaaatatagtttctttgggtgaaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctggtttgaaggtggtaaaattactagaggacacaaatatagtttctttgggtgaaact 500
Query: 301 ataatgtctgaaattaaagacatgcttgaagatattaataggacaattttattaattttt 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 501 ataatgtctgaaattaaagacatgcttgacgatattaataggacaattttatttattttt 560
Query: 361 taaaaatgattgtaaagatattcctatagaa-tactccaatattatatgttataa 414
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 561 aaaaaatgattgtaaagatattcctatagaaatactccaaaattatatgttataa 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
