Query= MSMg01no106_b10.b1 MSMg01no106_b10.b1 CHROMAT_FILE:
MSMg01no106_b10.b1 PHD_FILE: MSMg01no106_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:01 2005
(605 letters)
>mm_chr12_92535853_92536856
Length = 1004
Score = 1023 bits (529), Expect = 0.0
Identities = 587/607 (96%), Gaps = 5/607 (0%)
Strand = Plus / Minus
Query: 1 tcttccaaaaaggctgtgcctattccagca-ggcc-cttacctcccaattcttctaatcc 58
|||||||||||||||||||||||||||||| |||| | |||||| ||| ||||||||||
Sbjct: 943 tcttccaaaaaggctgtgcctattccagcagggccac--acctcctaatccttctaatcc 886
Query: 59 ttgcaaacagttccattctctggtgactatgcatttaaatatatgagtttaagggagcca 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 ttgcaaacagttccattctctggtgactatgcatttaaatatatgagtttaagggagcca 826
Query: 119 ttcttattcaaaccaccgtgccctgcattcttagtagatgctaaggacctttgatagata 178
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ttcttattcaaaccaccatgtcctgcattcttagtagatgctaaggacctttgatagata 766
Query: 179 tcatatttatgtgatagatacactgatcctaccaccttagctctaaaaggcaattcagag 238
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 765 tcatatttatgtgatagatacactgatcctaccatcttagctctaaaaggcaattcagag 706
Query: 239 ggcaagtaacctcttagttttaaggctacacccataattaggaatgttggaggaaagttt 298
|||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||
Sbjct: 705 ggcaagtaacctcttagttttaaggctaaacccatgattaggactgttggaggaaagttt 646
Query: 299 ctgccattagcttcatatcccctttctatgatcacctcctgaaagctgtcaccattctct 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ctgccattagcttcatatcccctttctatgatcacctcctgaaagctgtcaccattctct 586
Query: 359 gtagaccttattcttgcttccacaacacctttgtgtgaggcagggtatattagtccattg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gtagaccttattcttgcttccacaacacctttgtgtgaggcagggtatattagtccattg 526
Query: 419 ggtttgccccttgggcgttgcaaatgtggatgttagagtaaatttatggccagtagtagc 478
||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||||||||||
Sbjct: 525 ggtttgccccttgggtgttgcaactgttgatgttagagtaagtttatggccagtagtagc 466
Query: 479 ttgtttgacttcaaagctatttccactgaaaggtgatttttttttttccttcttcatttc 538
|||||||||||||||||||||| ||||||||||||| ||||||||| ||||||| |||||
Sbjct: 465 ttgtttgacttcaaagctattttcactgaaaggtgacttttttttt-ccttctttatttc 407
Query: 539 atcataagatccaaaagaaccataataatgtttttttatagttctggtagtactacatat 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 atcataagatccaaaagaaccataataatgtttttttatagttctggtagtactacatat 347
Query: 599 aatttgt 605
|||||||
Sbjct: 346 aatttgt 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1004
Length adjustment: 10
Effective length of query: 595
Effective length of database: 994
Effective search space: 591430
Effective search space used: 591430
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_b10.g1 MSMg01no106_b10.g1 CHROMAT_FILE:
MSMg01no106_b10.g1 PHD_FILE: MSMg01no106_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:01 2005
(309 letters)
>mm_chr12_92419091_92419799
Length = 709
Score = 551 bits (285), Expect = e-161
Identities = 303/313 (96%), Gaps = 8/313 (2%)
Strand = Plus / Plus
Query: 1 gttttcagagaggaaaccaagaaaggggataatacttgaaaagtaaagaaaatatctaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttttcagagaggaaaccaagaaaggggataatacttgaaaagtaaagaaaatatctaat 260
Query: 61 aaaaaagtcaatatttaaaggaaaaaaagaagagttaatggacaggaaattgagtgtgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaagtcaatatttaaaggaaaaaaagaagagttaatggacaggaaattgagtgtgga 320
Query: 121 ttttaacttttgaaaatgtattaaaatagagaggctctaactggctgtcagggaaggcag 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 ttttaacttttgaaaatgtattaaaacagagaggctctaactggctgtcagggaaggcag 380
Query: 181 gataagaatctaaagagaaagaaggatcgccatgctccagagacaggccttatgcaacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gataagaatctaaagagaaagaaggatcgccatgctccagagacaggccttatgcaacac 440
Query: 241 ctttgagagaagagttgagcaacgtaccagacttgagttgaggattttaaga----tcca 296
|||||||||||||||||||||||| ||||||||||||||||||| |||| ||||
Sbjct: 441 ctttgagagaagagttgagcaacgcaccagacttgagttgagga----aagaaagatcca 496
Query: 297 gaaggttgaagac 309
|||||||||||||
Sbjct: 497 gaaggttgaagac 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
