Query= MSMg01no106_j18.b1 MSMg01no106_j18.b1 CHROMAT_FILE:
MSMg01no106_j18.b1 PHD_FILE: MSMg01no106_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:07:18 2005
(503 letters)
>mm_chr12_21181538_21182440
Length = 903
Score = 934 bits (483), Expect = 0.0
Identities = 498/503 (99%)
Strand = Plus / Plus
Query: 1 tcttaggggcagcagcaaaaataactttatggttgggggtcaccacagcatgaggaaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttaggggcagcagcaaaaataactttatggttgggggtcaccacagcatgaggaaccg 260
Query: 61 ccccaaggggtcacagcattaggaaggttgagaacaactgatccgagagacagtgtagaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtcaaggggtcacagcattaggaaggttgagaacaactgatccgagagacagtgtagaa 320
Query: 121 taatcttgtgaactttcttggtgcctctgagggctggaaggtgaagagcgatcggctatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatcttgtgaactttcttggtgcctctgagggctggaaggtgaagagcgatcggctatg 380
Query: 181 caaactgtcaacctcccaggcggatgctgtcacccagcactgcttgccttcacgtaatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaactgtcaacctcccaggcggatgctgtcacccagcactgcttgccttcacgtaatac 440
Query: 241 tggaccaccttgcagaatccgaacctgtttcctcagagctattacaagatgaaatgtgac 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 441 tggaccaccttgcagaatccgaacctgtttcctcagagctaatacaagatgaaatgtgac 500
Query: 301 ttacctgtttggttgagtccgatcagcaggggcagccatcgaatggggctttggactctg 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ttacctgtttggttgagtccgatcagcaggggcagccatcgaacggggctttggactctg 560
Query: 361 tctttcagggactataactgtctctcatcaaaccctagaagttgtccgggctccttggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctttcagggactataactgtctctcatcaaaccctagaagttgtccgggctccttggct 620
Query: 421 caggggctgggggtggaatgagagggcatcttaccaagtctgtatggtcaggttgatcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caggggctgggggtggaatgagagggcatcttaccaagtctgtatggtcaggttgatcaa 680
Query: 481 atcaaatcaaaggaaaaaggcta 503
|||||||||||||||||||||||
Sbjct: 681 atcaaatcaaaggaaaaaggcta 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_j18.g1 MSMg01no106_j18.g1 CHROMAT_FILE:
MSMg01no106_j18.g1 PHD_FILE: MSMg01no106_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:07:18 2005
(322 letters)
>mm_chr12_21329426_21330147
Length = 722
Score = 576 bits (298), Expect = e-169
Identities = 316/326 (96%), Gaps = 8/326 (2%)
Strand = Plus / Minus
Query: 1 tgctcacaagccaacacattttaaccaagataatttgtaaactctgaggacagttaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tgctcacaagccaacacattttaaccaagataatttgtaaactctgaggacagttaacca 463
Query: 61 agcctgtgccttgtctctcctgaggacgcctgttacactaatacttgaatatataccttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 agcctgtgccttgtctctcctgaggacgcctgttacactaatacttgaatatataccttg 403
Query: 121 tggtatttgctctttttactagtcatgatagtcttgtattttaattacactttgatgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tggtatttgctctttttactagtcatgatagtcttgtattttaattacactttgatgatt 343
Query: 181 tgctatagggagagtggggtgtgtgggtatatgtatgaatgaaacagttggcagaatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tgctatagggagagtggggtgtgtgggtatatgtatgaatgaaacagttggcagaatata 283
Query: 241 ataaaaccatttttataaaattgtgactttttaaacc----ttttttgtcttaattgtat 296
| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 282 agaaaaccatttttataaaattgtgactttttaaaccaaaa----ttgtcttaattgtat 227
Query: 297 tactttttttttctttgccatgtaca 322
||||||||||||||||| ||||||||
Sbjct: 226 tactttttttttctttggcatgtaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
