Query= MSMg01no107_c20.b1 MSMg01no107_c20.b1 CHROMAT_FILE:
MSMg01no107_c20.b1 PHD_FILE: MSMg01no107_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:41 2005
(373 letters)
>mm_chr12_105991644_105992416
Length = 773
Score = 650 bits (336), Expect = 0.0
Identities = 364/376 (96%), Gaps = 6/376 (1%)
Strand = Plus / Minus
Query: 1 gggtagggataaatatatattaggactg---gacctttgaattgtggggaagaaattggt 57
|||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 431 gggtagggataaatatatattaggactggaagac---tgaattgtggggaagaaattggt 375
Query: 58 gcgttttgatgtgttattggttggtgagggagggtctttccaggggcaactcgtgtgggt 117
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gcattttgatgtgttattggttggtgagggagggtctttccaggggcaactcgtgtgggt 315
Query: 118 tgagtgaatcatgtgggaagagtctcttctgcagctgtgtttctgttagttaatgttctt 177
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgagtgaatcatgtgggaggagtctcttctgcagctgtgtttctgttagttaatgttctt 255
Query: 178 gagagctggacactgtccaactgcatatgtaaacgtgagcttttgtggatatggatatat 237
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gagagcaggacactgtccaactgcatatgtaaacgtgagcttttgtggatatggatatat 195
Query: 238 atcatatatacatgcatatatatcacatatatgtatgatatggtatatatcatatatacc 297
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 194 atcatatatacatgcatatatatcacatatatgtatgatatggtatatatcacatatacc 135
Query: 298 atatacattatatagtacatattttttatattatacattggatggtacatatacattata 357
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 134 atatacattatatagtacatattaattatattatacattggatggtacatatacattata 75
Query: 358 cataatatctagcatg 373
||||||||||||||||
Sbjct: 74 cataatatctagcatg 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_c20.g1 MSMg01no107_c20.g1 CHROMAT_FILE:
MSMg01no107_c20.g1 PHD_FILE: MSMg01no107_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:41 2005
(282 letters)
>mm_chr12_105940387_105941068
Length = 682
Score = 545 bits (282), Expect = e-160
Identities = 282/282 (100%)
Strand = Plus / Plus
Query: 1 gcccagaacgagaatcgtgccttacctttttgcttctcatatatgaaaggcggccttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcccagaacgagaatcgtgccttacctttttgcttctcatatatgaaaggcggccttcat 260
Query: 61 gagcatcagggtacgtgcaaaacagatatgtggtgatagcatgctttaaaaaggagtcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcatcagggtacgtgcaaaacagatatgtggtgatagcatgctttaaaaaggagtcgc 320
Query: 121 caagcatctcaagccgctccaggttaaacccatcactggcatttgacagtgtcaaagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagcatctcaagccgctccaggttaaacccatcactggcatttgacagtgtcaaagcct 380
Query: 181 ggagaatcagtcccggattggggccaagagtccttgaggagtacccaacagaagggctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagaatcagtcccggattggggccaagagtccttgaggagtacccaacagaagggctct 440
Query: 241 gctcagagtccatcctgtccttgagtgctttaacagcattca 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcagagtccatcctgtccttgagtgctttaacagcattca 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
