BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-107K01.T7 (MSMg01no107_k01.b1) | MSMg01-107K01.TJ (MSMg01no107_k01.g1) |
ACC | AG321338 | AG321339 |
length | 1,240 | 1,301 |
length of high quality (start - end) | 244 (164 - 407) | 273 (133 - 405) |
definition | CHROMAT_FILE: MSMg01no107_k01.b1 PHD_FILE: MSMg01no107_k01.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:09:46 2005 | CHROMAT_FILE: MSMg01no107_k01.g1 PHD_FILE: MSMg01no107_k01.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:09:46 2005 |
singlet/doublet | doublet | doublet |
---|
BLAST hit | unique | unique |
---|
Map location. | (73,088,352 - 73,088,595) | (73,257,202 - 73,257,474) |
---|
sequence | NCCGGCTCTTTTNTGGACATTGCGCGCTAACGACTCCTATGGGAGAGGAT
CCGCGGAATTCCTAGATAAAAAGAANACCTTTGAGGGCCCCANAGNGNAN
GAACNNGAANANNNGAGACTTTAAAAGGCTCCCTGNNNANNGNNGNNNNG
NNCATANCAGAANCTTTAGAGATNAGNTTATAAAACCATGAATCAAGCTA
GACTACTCTAATGTGGTGTGTGAAGAATGTTATGTTTTTCCCTAAAGAGT
TCTGTTTTGTAATAGAATATTTCCAAATAAGTCAAACATCGAGAACAGCT
CTACATTAAGAGAAAATGGTTGGAAAAAAATATGTTTTAAAATCTGAGGG
CCAGTGAGATGTCTCAGTGGGTAAAACCACTTGTGATGCAAACCTGACGG
CCTGAGTTCTTTTTTGGTGCCCACCAGGAGGAGAGAAGTCACTGTCAAAG
NTGACCTCTGATTTCTTCCCCGCCACCACTGCACAAATGCACCTGCATAC
ATAACATGCGTACACCCAACTAAACCTTAAAATATTTAAAGTAATTATAA
AATATGTAAAACATACATGTCTTAGTCAAATTTGTTATGCATAAAAACAT
GGAAAACATTCTTTAGTGTGCATAATATCACTGTAATACTGAAAGCTTTA
ACAATATAAGCAATGCAGGTAACACAAGATAAATCAAGTCAATTAGAAAC
CATGGACTTGAAGATGATACAAACTTACTGTGGTCTGAATCTGAAGAAAA
TAGAAGGTTGAATTAGAAAGTAGTTGATAGGCACAGGATTGAGAATTCTG
TGGACTCTGGAGCCTGAACTCTGGAGTGGGCCGAGCAGGGCCTGCAGAAA
CTGGGCCCCTTACCCTAGGAACAGGGTACTGATAGGTATTAGCGCCCCCC
CTGGGGTTGTCCGGGTAAAAGCCAGGAACTTCTTTAGAAAAGCCAACTCT
CTAAAGTTATGAAAAAAGAAAGGCCCCTCGAAGAAACCACGTTACGGGTT
AAGAGGGGGCTATAGAAAAAAATGGCACCAACTGGGTTAACTGCTGGTAT
AATTTGGTTAAATTTTTCAAAAAGGATACCCCCACCCTCGGAGTTTGGGC
CGGCCTGTGAAAATAGAACTTCTTTTAATAATTTCCGGAACTGTGTAAGA
TTGGAGCCATAATGGGGTTGGGCCGACTCAAAATATGGGGGAAATAATTA
TAGATGCTCACAGCTCGCACCTATGGGATTCCCTTAATAT
| CGATTGTTTTNNAAACCATTGGAXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXGCACTTTTAAGGCTAGNAANCTCTGT
GGCCAGGTCAGGCTGATCCCTTTAAGGGCCCAAAAAGAATTGAATGTGAT
TCTTTGAGCAGCATATCTCTTCAAGACAGGGGTGGCTGAGGGCCAGAGAC
AATGAATTCTAGGCCACATGCATGCAGTTATGCTAGCATGTACAATTTAT
GAAACCCAGACTGGAAAATATGAAACTGGACAATGAACATCAGGCCTAAT
CCTGATAATTGACTTAATCATGTGATGCTCTAAAGAAACTGAACAGTTTT
TGCCCTGTTGGGTGACTTTCTAGAGAGCTACTGAATTAACATCTCTCCCT
AGAGTGGTGTTTTTTTCAATCAGCTAAACAATGTCTCGTTCAATTTTATC
TTGGTGAACAATTTTTTTTCCCCCCCCCCGGTAGGTGGCGCTGCACGCCT
TAAAAACGAGGACTATGGAGGCAAAGGCAGGCAGATTTCTGAGTTCGAGG
CCTGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACTAAGA
ATCCCTATCTTGAAAAAAAAATGGGTTTATTAGAACAGACCTGCACACAT
CCTTATAGAACAGACTCCTCATAGATTTTTTCTTACTACTGCATTTATAC
ATCTACTCCATCAAATTTTGTGTTTTCTGTTTTGTTTCACAATTATCTTT
TGTTCAAGTTTGACTTTCCCACCAACCACCTATATTATCCACTTCGATGT
TTTGTTTCTTTTACTTAAAGGTTTGACTCCTCTCATCCATCCCTTTTATA
TATTTCAAGGAGTGTATTTTTTTAAATGGCTTAAAATTAACTTGCTTTCC
CGCTTTCTCATCCCCCTTTGTTCGATTTTGGGAACGTTCTATTTGTTGTT
TCGAACTTTTCATTCTCCTTCTTTTTTTATTTAATGTTTTTGTAATTTAT
TCCTTCCCACCCCACTTTACTTTCTTATTTTGTTAATATTTATGTTATAA
CTTTTTTTGCACTCAATATCTTTTGTGTAAAATTTTTGCAGATATAATTT
CTCGATAAACTCTCTTTCCTTCTATATTTTCTAGTGTCTCTCTATCCTCT
CATAACATATTTATCTTCCCCCGTCTTTATCCTTCTTAAATCTATCCCAT
AACTATATCCTATCGTGGGCTAATACACTCTCCCTCTACTNTCTTATCAC
TTCCCATATCTTATAACTCCTCCATTCTTCTATTATAGTATCCTTCATTA
A
|
quality values | Open.Hide. 0 3 10 10 8 8 6 6 8 15 17 3 0 3 6 6 7 8 8 8 8 6 6 6 8 8 8 8 8 8 8 10 12 12 8 8 8 8 8 8 8 26 19 28 28 37 37 37 34 36
33 37 34 33 37 37 35 36 36 39 36 36 35 28 28 28 31 31 34 34 28 15 7 7 3 0 3 6 7 6 6 6 6 6 6 6 6 6 6 6 10 3 0 3 3 0 3 0 3 0
3 21 21 3 0 0 3 27 3 0 3 0 0 0 3 11 9 9 9 12 12 16 15 17 12 11 8 8 6 6 6 6 10 21 3 0 0 0 3 0 0 3 0 0 3 0 0 0 0 3
0 0 3 23 23 3 0 3 23 23 23 3 0 3 23 23 37 39 39 36 23 23 3 0 3 3 0 3 23 23 37 37 37 37 47 44 44 47 37 39 37 37 37 39 43 43 43 43 43 48
48 50 50 50 50 47 47 47 47 47 43 48 43 43 43 41 43 39 43 43 39 39 46 46 48 59 59 54 57 47 47 57 57 57 47 47 47 57 57 47 47 43 48 43 50 54 57 59 57 57
57 44 46 37 44 44 47 44 42 35 35 43 43 43 44 50 57 57 57 57 57 57 57 57 57 57 57 59 57 57 43 43 39 43 43 52 52 59 59 52 52 52 57 57 54 52 57 52 54 57
57 57 54 54 54 57 57 52 43 43 43 50 44 46 46 48 59 59 57 44 43 50 50 57 57 43 43 43 57 57 57 54 57 54 57 44 41 30 17 17 20 32 44 46 57 57 57 57 57 48
48 48 57 57 43 43 46 46 46 46 46 46 47 47 36 41 26 28 34 43 39 48 43 47 43 43 43 43 47 48 48 57 48 48 48 48 43 43 43 47 47 48 47 46 48 48 48 48 48 40
43 40 32 32 28 28 8 11 6 6 8 8 17 17 20 23 20 28 34 34 36 43 43 44 44 43 43 43 46 43 48 48 48 48 43 43 39 37 33 37 37 43 39 39 39 39 43 27 23 3
0 3 23 23 37 37 27 23 16 12 12 12 13 11 11 9 10 14 12 9 9 9 9 9 9 11 23 22 37 37 34 34 25 25 30 41 34 25 25 17 17 22 30 30 26 26 12 10 9 9
9 9 9 10 12 12 21 16 30 30 43 46 37 37 28 33 25 29 25 28 30 40 37 37 30 30 37 42 39 46 46 46 57 59 59 46 42 39 35 35 31 31 20 20 20 28 28 28 28 36
24 20 20 20 30 30 47 43 47 47 57 41 32 29 19 15 15 30 32 31 23 28 22 28 19 24 24 28 32 43 42 38 36 23 23 32 44 37 42 34 41 42 42 43 43 43 44 43 43 43
43 37 36 24 19 23 27 27 39 44 46 48 48 33 29 21 15 15 13 13 19 27 27 25 29 32 40 37 35 35 30 30 25 25 25 34 34 43 43 48 39 34 28 23 23 23 23 28 21 16
18 24 20 15 12 13 11 13 13 23 23 23 20 23 23 23 23 24 26 33 28 28 14 14 14 26 15 13 8 8 8 13 16 13 13 11 15 11 11 13 10 12 18 22 14 14 14 14 12 19
23 24 28 33 33 30 34 28 28 24 19 19 19 28 32 32 27 15 15 14 13 13 13 13 14 30 26 31 26 23 8 8 8 8 8 10 18 13 11 11 11 11 17 16 17 16 16 19 11 11
12 12 11 11 9 14 14 10 10 10 17 15 20 23 26 26 24 22 16 16 16 22 22 18 20 11 8 8 10 10 10 9 10 10 9 9 8 8 8 8 8 8 9 11 11 9 19 9 9 9
10 10 12 14 17 22 28 30 28 21 14 14 14 22 16 16 11 11 11 12 11 12 14 10 12 12 12 10 9 9 8 8 10 11 10 10 9 10 10 9 10 9 10 9 8 8 8 8 8 6
6 8 8 9 8 8 8 8 8 8 9 9 10 10 12 10 12 19 21 15 16 18 16 16 14 13 10 10 10 8 8 7 6 8 8 10 10 8 10 8 8 9 10 10 17 18 20 13 12 8
8 10 8 8 10 10 10 10 10 12 15 10 8 8 8 8 11 9 10 10 10 10 10 10 11 8 8 6 6 8 8 8 8 8 10 8 9 10 11 8 8 8 8 11 8 8 8 8 15 10
10 10 10 10 10 10 10 8 6 6 12 15 15 19 13 10 11 11 12 16 16 16 11 10 12 21 12 9 9 8 7 6 6 8 6 12 13 8 8 8 8 10 10 8 8 8 8 11 11 12
11 8 8 6 6 6 12 10 8 8 8 13 8 8 8 8 8 10 9 9 10 8 8 8 7 8 8 8 8 8 11 11 11 11 11 12 12 11 11 11 11 11 9 10 9 9 9 9 10 10
13 24 10 12 10 10 9 9 11 9 10 8 8 8 10 15 12 10 10 10 14 15 18 14 11 9 11 11 11 11 12 8 8 6 6 8 8 9 8 8 8 8 10 8 17 19 11 8 8 7
7 6 6 8 8 8 6 6 8 6 8 9 9 9 8 8 10 10 10 10 11 11 11 12 11 9 9 9 9 9 10 10 13 8 8 8 14 10 12 9 9 9 9 12 12 11 10 9 9 9
9 11 10 9 9 8 10 8 8 8 8 8 8 9 8 8 8 8 10 7 7 6 6 8 6 6 6 8 8 10 8 10 10 8 8 8 16 15 10 10 13 13 16 15 11 11 8 8 8 8
8 8 8 8 6 6 6 6 8 8 8 8 8 10 8 8 8 8 8 8 8 8 9 9 6 6 6 6 6 6 10 8 10 8 8 8 8 8 8 8 | Open.Hide. 6 6 6 8 6 9 10 8 8 3 0 0 3 9 10 6 6 6 7 7 6 8 8 8 7 7 9 7 7 7 14 9 9 10 10 9 9 9 11 10 13 11 10 8 9 9 14 19 30 15
21 21 28 28 28 28 28 28 28 24 24 23 24 28 37 37 39 34 28 14 13 9 7 7 6 6 6 6 7 7 9 7 7 7 6 9 9 9 8 3 0 3 3 0 3 17 19 21 24 28
30 31 33 41 36 28 28 26 28 22 22 22 19 19 13 6 7 7 8 8 12 12 11 11 9 6 6 6 6 6 10 10 13 13 28 28 47 59 59 48 47 43 37 37 37 43 43 48 47 47
50 47 47 48 57 59 43 39 30 30 30 30 32 32 41 41 41 54 57 48 48 47 47 47 47 47 47 47 48 48 42 44 37 39 43 39 42 42 24 24 15 13 10 10 10 15 18 28 28 35
42 42 42 42 37 37 37 42 42 47 43 48 50 50 43 44 43 50 35 42 33 44 42 44 43 52 57 52 52 57 57 43 43 32 28 28 32 43 43 37 37 37 37 43 43 43 43 52 52 43
43 31 31 31 33 41 43 28 29 28 36 43 39 35 35 43 28 43 23 23 18 32 30 42 45 43 44 35 35 35 39 42 45 52 57 52 52 52 57 43 43 39 43 43 35 35 43 44 39 39
43 44 39 43 39 44 44 57 57 52 52 52 52 38 38 20 20 20 38 38 52 52 52 45 52 52 47 44 35 35 33 43 43 52 43 38 38 20 20 28 36 23 33 38 43 43 52 50 43 43
52 52 57 57 44 43 29 29 43 32 32 32 28 28 43 43 52 57 57 44 43 35 35 37 43 43 37 37 50 37 37 36 36 31 42 36 47 42 42 35 42 42 46 59 57 57 54 48 42 42
28 24 24 19 19 16 18 12 11 10 10 13 13 12 17 13 10 10 10 25 30 35 35 39 36 33 23 23 23 23 18 28 18 41 41 39 39 33 33 19 17 14 14 14 28 30 43 48 48 48
37 37 23 21 15 13 19 22 20 16 10 8 8 6 8 8 8 10 10 9 9 10 9 15 15 16 13 12 8 8 8 8 6 8 10 10 13 12 10 8 8 8 8 8 12 17 15 15 12 12
12 13 11 15 11 11 11 11 12 11 12 12 14 21 12 12 11 11 11 18 18 19 16 16 12 12 12 15 15 12 10 13 10 10 11 22 22 33 29 24 24 15 19 15 10 10 10 11 12 21
19 21 20 20 15 15 19 11 12 11 11 12 16 12 12 12 12 12 13 15 18 19 20 20 20 26 15 13 13 18 15 10 12 12 15 15 12 11 9 9 9 15 13 16 11 10 10 10 10 8
8 8 8 8 10 32 34 25 17 8 8 8 10 8 10 10 11 10 12 17 19 16 11 9 9 9 10 9 10 11 12 11 11 11 12 12 12 12 12 12 11 11 16 9 9 9 10 12 13 28
18 15 14 10 9 9 10 10 15 11 12 11 9 9 14 13 10 9 9 8 10 8 10 8 8 8 14 22 31 18 15 15 9 9 9 12 12 11 15 11 11 11 15 11 10 10 8 9 10 15
19 23 19 13 9 9 9 9 9 9 9 10 10 10 12 13 13 10 10 8 8 8 8 13 15 10 8 8 7 8 8 10 13 17 10 10 10 10 10 10 10 12 11 9 8 8 8 8 13 11
12 12 10 10 12 12 12 12 21 15 15 14 11 14 15 19 16 10 8 8 8 8 8 8 6 6 8 8 10 8 8 8 6 6 8 8 9 9 9 8 8 6 6 6 6 8 8 12 13 12
10 10 9 9 9 15 15 12 12 15 13 13 13 13 9 10 10 12 17 15 14 14 13 18 10 8 8 8 8 10 8 8 8 8 8 8 8 8 8 9 10 13 10 11 8 8 10 8 10 7
6 8 8 10 15 15 10 10 10 10 10 10 10 10 10 11 11 11 22 15 10 10 10 10 8 8 9 8 8 8 9 10 10 15 9 8 8 8 8 8 10 10 10 8 8 8 8 8 8 9
10 9 10 10 12 8 10 8 8 8 8 10 19 19 23 10 11 11 10 10 9 9 9 9 9 8 8 8 6 6 8 10 10 10 10 10 9 9 11 11 10 10 7 6 7 7 8 6 6 8
8 8 6 6 8 8 10 12 12 16 11 10 10 10 8 10 10 11 11 11 11 11 9 8 8 8 8 10 8 8 8 8 8 8 6 6 8 10 12 10 8 7 7 8 9 11 20 11 8 8
8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 6 6 8 8 8 15 13 8 8 8 8 8 8 10 10 10 11 11 11 11 8 8 6 6 8 8 8
8 8 8 8 8 10 8 8 8 6 7 8 8 10 10 9 9 8 8 12 10 10 8 9 9 9 9 9 12 11 13 15 11 11 11 8 8 8 7 7 7 8 8 8 8 8 8 9 12 13
11 10 8 8 8 8 8 8 8 8 8 8 8 10 9 13 12 9 8 8 6 6 8 6 9 10 10 15 15 10 8 7 8 6 6 9 10 10 15 10 10 10 9 10 8 8 6 9 8 8
8 8 8 8 8 8 10 11 11 15 16 13 12 9 9 10 10 15 24 19 19 10 10 8 8 8 8 11 10 10 13 10 8 8 10 12 10 10 10 10 10 16 19 13 9 9 11 11 11 8
8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 8 8 8 8 8 8 10 8 8 8 8 6 6 8 6 6 10 7 6 8 8 6 6 3 0 3 6 8 8 10 8 8 8 8
11 8 8 8 8 6 6 8 10 10 10 8 9 6 8 6 6 8 8 6 6 8 6 6 8 8 11 11 8 8 8 8 9 10 10 8 8 6 7 8 8 8 6 6 8 6 6 8 8 8
6 |