Query= MSMg01no108_k22.b1 MSMg01no108_k22.b1 CHROMAT_FILE:
MSMg01no108_k22.b1 PHD_FILE: MSMg01no108_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:37 2005
(606 letters)
>mm_chr12_112581380_112582386
Length = 1007
Score = 1000 bits (517), Expect = 0.0
Identities = 571/589 (96%), Gaps = 1/589 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatgtcttcctcccatga-agtggctcttccatgatgctcgtcctttgacacag 63
||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcaatgtcttccttggatgacagtggctcttccatgatgctcgtcccctgacacag 264
Query: 64 ccactggccttctgagtccaggatggatgccctacacaatgttccctacatccacatcag 123
||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct: 265 ccactggccttctgagtccagtagggatgccctacacaacgttccctacatccacatcag 324
Query: 124 catggtggctgctcttagtggcctccatgctgtttatctgtggcttacaaagcaacagcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catggtggctgctcttagtggcctccatgctgtttatctgtggcttacaaagcaacagcc 384
Query: 184 aagcctgctgcaaactgagtcaacaggaaacagtctctgtgcagatcagcagctctgggt 243
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagcctgctgcaagctgagtcaataggaaacagtctctgtgcagatcagcagctctgggt 444
Query: 244 gcaaggctactgctgtaccagagaggctcttccctcctgagagccagccacgggctagca 303
||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 445 gcaagaccactgctgtaccagagaggctcttccctcctgagagccagccacgggcaagca 504
Query: 304 aatgaggcgctgccactttaaagccattctggcttcactgctgcagaggacagcagagct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatgaggcgctgccactttaaagccattctggcttcactgctgcagaggacagcagagct 564
Query: 364 ggcttcagacaagctcagatgctctgaaggggacgcacaagaacctggatgctgagaaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggcttcagacaagctcagatgctctgaaggggacgcacaagaacctggatgctgagaaca 624
Query: 424 agaccttcaacactggaactctcacaagcctcactcctcaccagatacacatctggacaa 483
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 625 agaccctcaacactggaactctcacaagcctcactcctcacaagatacacatctggacaa 684
Query: 484 ccaacaaaatagctgataaaacacatggaagaatgtgtgtgtcacagagaaacatccatt 543
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 685 ccaacaaaatagctgataaaacgcatggaagaatgtgtgtgtcacagagaaacatccatt 744
Query: 544 aagaatacgtagaaatgaaacattcaagtaaaatttagtgtaaaaaaaa 592
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aagaatatgtagaaatgaaacattcaagtaaaatttagtgtaaaaaaaa 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1007
Length adjustment: 10
Effective length of query: 596
Effective length of database: 997
Effective search space: 594212
Effective search space used: 594212
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_k22.g1 MSMg01no108_k22.g1 CHROMAT_FILE:
MSMg01no108_k22.g1 PHD_FILE: MSMg01no108_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:37 2005
(413 letters)
>mm_chr12_112673549_112674361
Length = 813
Score = 729 bits (377), Expect = 0.0
Identities = 404/413 (97%)
Strand = Plus / Minus
Query: 1 ctgcctgattctcttgaccctcttcttcaagagctcaaatgacaggcatgtgccaaccat 60
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 633 ctgcctgattctcttgaccctcttcctcaagagctcaaatgacaggcatgtgtcaaccat 574
Query: 61 gcctgatttatgggatgctgaggatagatccagggctttgtgggtgccagtcaagtgctc 120
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gccggatttatggggtgctgaggatagatccagggctttgtgggtgccagtcaagtgctc 514
Query: 121 tgccagctgaactacactcccagccctggtattagatttttaaatctgcgtcttctacgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tgccagctgaactacactcccagccctggtattagatttttaaatctgcgtcttctacgg 454
Query: 181 acatttaaaattttgacctagcgaatacagatcctaggccggtacagatcctgccagccc 240
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 453 acattttaaattttgacctagtgaatacagatcctaggccggtacagatcctgccagccc 394
Query: 241 agacccataaagtcagtaaagctgtataagaaaatactgtgagcccagtggtacacgcct 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 393 agacccataaagtcagtaaagctgtataagaaaatactgtgagcccaatggtacatgcct 334
Query: 301 ttattcccagcgcttgggaattagaggcaggcagatctctgtgagtttaaggtcagcctt 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 333 ttattcccagcgcttgggaattagaggcaggcagatctctgtgagtttacggtcagcctt 274
Query: 361 ccctacagagagttccaggtcatctggggctatatagtgagacctgcctcaaa 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ccctacagagagttccaggtcatctggggctatatagtgagacctgcctcaaa 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
