CCCCCCACTAACNNNNNTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXTCCAAGAGGAGCCGCGGAATTCACTTATTCTCCAATTGTTATGATTA
TGAAATCACACTGCAAATCTTTTATAAATAAATCAAAACATTTATAAAAA
TAAAGGTTTTATACACAATATAGGTATCTAAGGGGAAAAAAGTCACCAGT
TACTAGAACTTTAGATTTAAATTAGTGTAAGGAAAAATAAGAGTATGATA
TAGAATGCCAATATCAAATCAAGATGTGTCTTTGCCACATCCTACTCAAA
GTAAAATAGGCAGTATTCATTGCACAGTCATACGTGATGAGATTGTGCCA
TTTTAAGTATATAAAACCATCCTTAGCATCCATCCCAAATGCCCAACAAT
TTCCACAAATATATGATTTCTGTATAAAACAGAGAAAATGTCTCTTATCT
TTGAATATCAAAATTCAAGTATTTTGTTATGATTAGATTTTTATCATGTT
TATGCAGGCATGTGTGTGTGTACATGTGCCTGCCACAGAGCAAATAAGAG
AGTCTGAGGACAACTCATGGCAATTGATTCTCTCTCTTGACCAAGTGGAC
CACTGAAACTAATTCAGGTACTCAGGCTTGGCAGCAAGTGCATTTACCAG
GTAATTCATCTCACTGAACTTTTTTTTAAATTTCTTAATTTAAATATTTG
TCACTAACCATTAGCGCAAGGAA

GGGGCGCGATGACAGTGNNGAGGCCTGGGNGGNCGTCTGGTTCAAAACAA
AGAGGGNGANNCTATANGAATTTTCCTGCAGAAATTCTCTTNGAAGAGGA
ACAATTACTTCACGGGCTCAGAGTCTCTGACTGGAGGGCACGGCAACGCC
CACTCCATCTCGCTTGATCGCCCTCGTCTTCTCTGCTCTGAGGTCGCTTT
TCTACAAGTTTCCCTGCTCCCCCACTATCATGGCATCTTCTAACTACACT
GACCCCTCTCCTTTACCCTAACAGGCCTAGTTTTTAAAGAAAATTTTAAT
TATATATTTTATTTAAGTTATAATTGATCTGTAATAATAATATATTGTGT
CATATATCTGTATTGATACTTATCTAGATATGTTTTGTTTGACAGATAGA
GTAGAGAGTAGTTTTCCTATGACATAGAGGATAAATACAATACCAGCATA
CGCCCACTATTTTATGAATATGTGTCTAGAAAAAGCCTATTCTTTTTTTA
TGATACATCAATTCTATTACTTTACCAGTTGATATAAATAATCTTAATAG
CTTCATAATGTGGTATGTGTTATTTTTATATTACTAAATATACTATATTA
TATAAAATTATTTTATAATTAAAATACATATATTAACTTTATACGAAAAA
ACTAATATATATTATATTCTATTTTCATCTATAATATTCATCTCAGGAAT
ATATACTTCTTTTACAAGATACTGCTAATTTTTTATCCTAATCCCAACAC
ACTTAAATTAAAATATATTTTATATATAATAATTGATAATCTACTGTCTA
TTATAACTGAATAAATAATATATATTTCAATTAATTTATAGATTCTTTCT
CTTCTCCTCTATCATATATTTATGCATTCATGTACTAAG

Query= MSMg01no109_m16.b1 MSMg01no109_m16.b1 CHROMAT_FILE:
MSMg01no109_m16.b1 PHD_FILE: MSMg01no109_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:08 2005
         (563 letters)



>mm_chr12_63517119_63518081
          Length = 963

 Score = 1040 bits (538), Expect = 0.0
 Identities = 553/558 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcacttattctccaattgttatgattatgaaatcacactgcaaatcttttataaat 65
           |||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gaattcacttattctgtaaatgttatgattatgaaatcacactgcaaatcttttataaat 672

                                                                       
Query: 66  aaatcaaaacatttataaaaataaaggttttatacacaatataggtatctaaggggaaaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aaatcaaaacatttataaaaataaaggttttatacacaatataggtatctaaggggaaaa 612

                                                                       
Query: 126 aagtcaccagttactagaactttagatttaaattagtgtaaggaaaaataagagtatgat 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aagtcaccagttactagaactttagatttaaattagtgtaaggaaaaataagagtatgat 552

                                                                       
Query: 186 atagaatgccaatatcaaatcaagatgtgtctttgccacatcctactcaaagtaaaatag 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atagaatgccaatatcaaatcaagatgtgtctttgccacatcctactcaaagtaaaatag 492

                                                                       
Query: 246 gcagtattcattgcacagtcatacgtgatgagattgtgccattttaagtatataaaacca 305
           ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 gcagtgtccattgcacagtcatacgtgatgagattgtgccattttaagtatataaaacca 432

                                                                       
Query: 306 tccttagcatccatcccaaatgcccaacaatttccacaaatatatgatttctgtataaaa 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tccttagcatccatcccaaatgcccaacaatttccacaaatatatgatttctgtataaaa 372

                                                                       
Query: 366 cagagaaaatgtctcttatctttgaatatcaaaattcaagtattttgttatgattagatt 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cagagaaaatgtctcttatctttgaatatcaaaattcaagtattttgttatgattagatt 312

                                                                       
Query: 426 tttatcatgtttatgcaggcatgtgtgtgtgtacatgtgcctgccacagagcaaataaga 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tttatcatgtttatgcaggcatgtgtgtgtgtacatgtgcctgccacagagcaaataaga 252

                                                                       
Query: 486 gagtctgaggacaactcatggcaattgattctctctcttgaccaagtggaccactgaaac 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gagtctgaggacaactcatggcaattgattctctctcttgaccaagtggaccactgaaac 192

                             
Query: 546 taattcaggtactcaggc 563
           ||||||||||||||||||
Sbjct: 191 taattcaggtactcaggc 174


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)