TTCCCNCCTATCTATAATTGCGGCCGCTNTACGACTCCTATTCCGAGAGG
ATCCGCGGAATTCTCTGATTGCCCATAGAAAATGCACTGCACCTGCATGG
TGAAGCGACATCTCTGCTCTGGCACAGAGGGAGCAGAGAGATCAAGCTGG
GAGAAGCGTTGGGAGAGCTTAAATGTCTGAGATTACAGCTGCTCCTTCCT
TTCCTTTGTAGCATGATGATTGTTTTAACACGTGAAATAAACTCCAGCTG
TCATTTGCACCGCTTCGATATATGCGCTATGCCTTCAAGCAGAGACCATA
GGAGTTCCAGAAGCACTGATAATCATGCTTCCAAGGAAAACCTTTTACCT
GTGTTTTCATAAGCAGACATTGTGAGCCTATGTGCATTAGTGCATGTGTG
TGCCTGTTATGCAGTGAGGGTTTTTTTTTTCCCATCCGCATCAGGGTAAA
ACACAGGGGACTTTCGTTTCTAATAAAGCTTCCTAACTTCTCGAACATAA
AATTTCTTCATGATCAAGCTGCTCAGTCAGATCAGAGGAAAAAGAATTAC
AAACAGTCAATTTTAAGTGGAGCCAAACCACAGTTGTCAGCCAGTGATGC
CGCTGTTCCTTCTGCATGGGCTCCGGCAGCATTGCGCTCTCAAGACCGAA
GGACATGCCCACCCTGAGTGATTTTCCCCAGTACCGCATGTGAGTGGTAC
GGGTACTCCATACCTTTCCCCATTTCAATG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCACTTGAAGAGTGGAAGGAGGAATTGTAGGAGCCATAGGGGTCAAG
AACACTACAAAGAAACCAATAAAAGTCAATTAACCTGGCTTCATAGGGGC
TCATAGTGACTGAAGTGACAACCAGGGAACATGCATAAGACTGACCTAGG
ACCTATGCACATATAATTGTGTAGCTTGGTCTTCATGCAGGACTCCCAAC
AATGGGAGGAGGGGATGTCTCTGACTCTGTTTTCTGATTTTGGGAACCTT
GCCTCCTACTGGATCCAGTCTTAATATGAGGGAAGGTGCCTAGTTTTATT
GCAACTTGCTATGCCATGTTGTCCATGAGAGGCCTGACCTTTTCTAAAGA
GAAATACAGAGGAGGAGTGAATGTATGGGGTGGCCTTATTTTTCCCCTCC
TTATTTCCCCCTCCTTTCCCCCCCTATTACCCTTCTTTTATCTCCCCTTT
TCACTTTACCTCTCTTCCACTTATTCTTTTATTCTCCCCTTTTTTCTTCC
CATCTCCCCTTTTCCTCTCTTCCACCCCTTTTACTCCACCCCCATTTTTT
TTTTCCTCCCTTTCACTACTTTTTTCTCTCCCTTTTCCCCCCTTCTACCA
CCACTTATTTTTTTCACCCCATTTCTCCCTTTTCTCCTCTTCTCTTTTTT
TATTCTCTTCTTCCCCTTTTCTTCT

Query= MSMg01no110_d05.b1 MSMg01no110_d05.b1 CHROMAT_FILE:
MSMg01no110_d05.b1 PHD_FILE: MSMg01no110_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:42 2005
         (432 letters)



>mm_chr12_44920973_44921799
          Length = 827

 Score =  754 bits (390), Expect = 0.0
 Identities = 420/432 (97%), Gaps = 5/432 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatgcactgcacctgcatggtgaagcgacatctctgctctggcacagagggagcagaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgcactgcacctgcatggtgaagcgacatctctgctctggcacagagggagcagaga 260

                                                                       
Query: 61  gatcaagctgggagaagcgttgggagagcttaaatgtctgagattacagctgctccttcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatcaagctgggagaagcgttgggagagcttaaatgtctgagattacagctgctccttcc 320

                                                                       
Query: 121 tttcctttgtagcatgatgattgttttaacacgtgaaataaactccagctgtcatttgca 180
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 tttcctttgtagcatgatgattgttttaacacgtgaaataagctccagctgtcatttgca 380

                                                                       
Query: 181 ccgcttcgatatatgcgctatgccttcaagcagagaccataggagttccagaagcactga 240
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 tcgcttcgatatatgcgctatgccttcaagcagagaccataggagttccagaagcaccga 440

                                                                       
Query: 241 taatcatgcttccaaggaaaaccttttacctgtgttttcataagcagacattgtgagcct 300
            |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gaatcatgcatccaaggaaaacctttcacctgtgttttcataagcagacattgtgagcct 500

                                                                       
Query: 301 atgtgcattagtgcatgtgtgtgcctgttatgcagtgagggttttttttttcccatccgc 360
           |||||||||||||||||||||||||||||||||||||||||||||||    |||||||||
Sbjct: 501 atgtgcattagtgcatgtgtgtgcctgttatgcagtgagggtttttt----cccatccgc 556

                                                                       
Query: 361 atcagggtaaaacacaggggactttcgtttctaataaagcttcctaacttctcgaacata 420
           |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 557 atcagggtaaaacacatgggactttcgtt-ctaataaagcttcctaacttctcgaacata 615

                       
Query: 421 aaatttcttcat 432
           ||||||||||||
Sbjct: 616 aaatttcttcat 627


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 827
Length adjustment: 9
Effective length of query: 423
Effective length of database: 818
Effective search space:   346014
Effective search space used:   346014
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)