Query= MSMg01no110_e16.b1 MSMg01no110_e16.b1 CHROMAT_FILE:
MSMg01no110_e16.b1 PHD_FILE: MSMg01no110_e16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:50 2005
(618 letters)
>mm_chr12_99010804_99011818
Length = 1015
Score = 1125 bits (582), Expect = 0.0
Identities = 601/610 (98%), Gaps = 6/610 (0%)
Strand = Plus / Plus
Query: 5 gaattcttttctttcacaagaaaagagaaaataaaaagagccaccaattaacagccaaaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcttttctttcaaaagaaaagagaaaataaaaagagccaccaattaacagccaaaa 267
Query: 65 aaaaaaaaaaagtgaaagtaaagaaagaaagaaattcagcatttagccttcagggagaag 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aaaaaaaa---gtgaaagtaaagaaagaaagaaattcagcatttagccttcagggagaag 324
Query: 125 aaactgcaaacaaacaagaaactttagaaagaagatgtatttggcctttgccttttaaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaactgcaaacaaacaagaaactttagaaagaagatgtatttggcctttgccttttaaat 384
Query: 185 aatgctgcggtattacactgcatttagttctcactgtaaaaacttatctaacccaagtta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatgctgcggtattacactgcatttagttctcactgtaaaaacttatctaacccaagtta 444
Query: 245 attacatttccaatgatagttgggagagcaattgccaagatttactatacaaatgacata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attacatttccaatgatagttgggagagcaattgccaagatttactatacaaatgacata 504
Query: 305 taaatttagtctcagaataattaagtcggaatctaagtccatacattaagcaatgagagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaatttagtctcagaataattaagtcggaatctaagtccatacattaagcaatgagagc 564
Query: 365 ataattgcattcttatagatgcttaaaacttcacttgcaattcttgaaaaataggctcaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ataattgcattcttatagatgcttaaaacttcacttgcaattcttgaaaaataggctcaa 624
Query: 425 cagagactcagaaagcatttaatttcatttatgatttctccctcccccccccccatcctc 484
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 625 cagaggctcagaaagcatttaatttcatttatgatttctccctcccccccc---atcctc 681
Query: 485 ctatgtaagaaaaatacaaactataatttgagtagtattttacaggccactgtactttct 544
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 682 ctatgtaagaaaaatacaaactataatttgagtagttttttacaggccactgtactttct 741
Query: 545 tgggattttggaatctctttgtgcagttcatgcaagtaccgggaggtagattaagagatt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tgggattttggaatctctttgtgcagttcatgcaagtaccgggaggtagattaagagatt 801
Query: 605 ggggtcagag 614
||||||||||
Sbjct: 802 ggggtcagag 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1015
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1005
Effective search space: 611040
Effective search space used: 611040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_e16.g1 MSMg01no110_e16.g1 CHROMAT_FILE:
MSMg01no110_e16.g1 PHD_FILE: MSMg01no110_e16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:50 2005
(119 letters)
>mm_chr12_99097107_99097628
Length = 522
Score = 182 bits (94), Expect = 7e-51
Identities = 115/122 (94%), Gaps = 3/122 (2%)
Strand = Plus / Minus
Query: 1 ctccgcgtg-attatggaaatggaaaccca-tatttcctactcttc-agaccccagtgaa 57
||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 322 ctccgcgtgtattatggaaatggaaacccattatttcctactcttcaagaccccagtgaa 263
Query: 58 cgtttacatcatttcctgatgctttctttgcatatgcctaaattgtgtcttcctcgtggc 117
||||||||||||||||||||| ||||||||||||||||| | ||||||||||||| ||||
Sbjct: 262 cgtttacatcatttcctgatggtttctttgcatatgcctgacttgtgtcttcctcatggc 203
Query: 118 aa 119
||
Sbjct: 202 aa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 522
Length adjustment: 8
Effective length of query: 111
Effective length of database: 514
Effective search space: 57054
Effective search space used: 57054
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
