ATACTCGCCAAACTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCGCGGAATTCTCAGCTTCTCTAGAACCATGGGTGCATGCATG
CTGTCATGCTTCCTGCCATGACAGACTAAACCTCTGAAACTGTAAGCCAG
TCCCAATTCAATGTTTTCTTTGATAAGAGATGCCATGGACATGGTGTCTC
CTCACAGCACAAAACCCTAAGACAAACACTTTGATCTTTTAGATTATTTT
TATAAGCTTTAGAACAGAGACACACTGAACACATTTTCATTTGTTTCTTA
CAGAGAAATATATTAAAGTTTTCCATATAGACTATTTACTAATGACATAT
TTCTCTGTACTTAAAATGTTTGTTGGAATATGTCATTTATTGAAGATCTG
ACATTCCAATACTGTTGCCTCATGCTTGTAAAAAGTCTAGGACTTATTCA
ATGTGTTCTGTGATTTCTATTATCATTCATCTAGTCAGTACAGATGGGAT
AATGTATGCCCTAGTGAAGGGTGGCTGAATAGTGATGCTTTCTGCAATGA
ACATTTTAAAAACATGCATATTTTAGTTCTTGAGGTTATTATATTTTTTT
CTCCTCTTTCCTTCCTCCCAGGCATGCCTCATTGCTCTCCTTCAAGTTCA
TGCCTCTTTAAATAACCTATTGATGACTTCTTTCTTAATGTTTCTCACAC
TCACAGCATTTCTTAACTGCCTGTATG

GAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAAGAAGTTGGGCACCAACAGCCCAAAT
AACTCAATTTAAAAGTGGGGTACAGAGGTAAACAGAATTCTCCTGTGAAT
TTCATTGCTGTTAATAGCTGAGTAGTACTCTATTGTGTAAATATATCCAT
TCCTCTGTTGAAGGACATCTGGGTTCTTTCCAGCTTCTTGCTGTTATGAA
TAAGGTTGCTATGAACATAGTGGAACATGTGTACTTATTAGAAGTTGGAG
CATCTTCTGGGTATAAGCCCAGGAGAGGTATTGCTAGATCCTCAGGTAAA
AGTGGATGCTCCTGGTTCCAAGACTCCACCGAAAGAAAGTAGTCTGCACA
GGTGAGAGTGTGCACTACAGAAGCTAACAGCTTCTGGGACAGGCGGGAGC
CACAGAGATTCTGAGGCAGCACCCTTTTTGGGCTCCAGACATCAGGGCAC
CTTCCCGGCCAGAGAACAGGTATCTGCATGGCCCGGGAGGGCTTTCCCTC
AGCATCAGCAGGAGTCATCTTGGTTCCGGGACTCTGCCAAAAGTAGTCTG
CACAGGTGACAGTGTGGATTACAGAACCTAATAGCTTCTGTGAACGGCCA
AAGCAACACACCTTCTAGGAAAGGCCCTGTCTTGGTCCTTCATCTTCGTC
CCGATTGCAGTA

Query= MSMg01no110_l09.b1 MSMg01no110_l09.b1 CHROMAT_FILE:
MSMg01no110_l09.b1 PHD_FILE: MSMg01no110_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:23 2005
         (590 letters)



>mm_chr12_40379705_40380692
          Length = 988

 Score = 1046 bits (541), Expect = 0.0
 Identities = 575/587 (97%), Gaps = 4/587 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcagcttctctagaaccatgggtgcatgcatgctgtcatgcttcctgccatgac 64
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 946 gaattctcagcttctctagaaccatgggtgcctgcatgctgtcatgcttcctgccatgac 887

                                                                       
Query: 65  agactaaacctctgaaactgtaagccagtcccaattcaatgttttctttgataagagatg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 agactaaacctctgaaactgtaagccagtcccaattcaatgttttctttgataagagatg 827

                                                                       
Query: 125 ccatggacatggtgtctcctcacagcacaaaaccctaagacaaacactttgatcttttag 184
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 826 ccatggacatggtgtctcctcacagcacgaaaccctaagacaaacactttgatcttttag 767

                                                                       
Query: 185 attatttttataagctttagaacagagacacactgaacacattttcatttgtttcttaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 attatttttataagctttagaacagagacacactgaacacattttcatttgtttcttaca 707

                                                                       
Query: 245 gagaaatatattaaagttttccatatagactatttactaatgacatatttctctgtactt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gagaaatatattaaagttttccatatagactatttactaatgacatatttctctgtactt 647

                                                                       
Query: 305 aaaatgtttgttggaatatg-tcatttattgaagatctgacattccaatactgttgcctc 363
           |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 646 aaaatgtttgttggaatatgat-atttattgaagatctgacattccaatactgttgcctc 588

                                                                       
Query: 364 atgcttgtaaaaagtctaggacttattcaatgtgttctgtgatttctattatcattcatc 423
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 atgcttgtaaaaagtctgggacttattcaatgtgttctgtgatttctattatcattcatc 528

                                                                       
Query: 424 tagtcagtacagatgggataatgtatgccctagtgaagggtggctgaatagtgatgcttt 483
            |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 527 cagtcagtacagatgggataatgcatgccctagtgaagggtggctgaataatgatgcttt 468

                                                                       
Query: 484 ctgcaatgaacattttaaaaacatgcatattttagttcttgaggttattatatttttttc 543
           |||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||
Sbjct: 467 ctgcaatgaacattttaaaaacatgcctattttagttcttgaggttattat--ttttttc 410

                                                          
Query: 544 tcctctttccttcctcccaggcatgcctcattgctctccttcaagtt 590
           ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 409 tcctctttccttcctccaaggcatgcctcattgctctccttcaagtt 363


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 988
Length adjustment: 10
Effective length of query: 580
Effective length of database: 978
Effective search space:   567240
Effective search space used:   567240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)