ATACCGCGNNGAGTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCGCGGAATTCTCACACAAAGAAAGCTCATGAAGACCAAAATAA
CAAACCATAATATGTAAGCAAAAGACCTGTAGGGTTTTTAAAAAGCTCAA
ACAAAGCATCAGGAGATTCCACTCACCCAAAAAAAAGACCTCCAAAAATA
ACATTGAGTTTATTTTGTGTTGGCCACCTTCTGTTGGCCATGGGTTCTGC
CCTTAAGTGTGACTCGCATACCCAGTGAGATTCCATGGGGGCGGGGGAGC
ATATTTTTTCCTTTTCAAGTAGTTATCAAATGGAGATAGCTTCTGGGCTA
GAGATGGAGGCTTATGTCCACTTCCTCTCTTGATGCTGGGACCCCATTTG
GCTCAGACTTGTACAGATATTGTGTACACTTCCAGAATCTCTGAGTTCCT
ATGTGTATTAGTTCTGCTGTGTCTAGAAGGCCCTGTGTCCATGGTTTCTT
CTATCATCTTTCTTCCTCTTCTTCTGCATAGTCCCATGATCTTTGAGAGG
AGAGATTTGATAGGAACATTCCATGTGCAACTGAGTGTTTCAAGGCATCC
AACTCTCTGCAGTTTTTCCAGGATGTTTGGTAAACAAGCTATAATCCACA
TAACCAAAGATGTTAGGTATAGAACAGAATATTATCAGGTAAAGGAGTAC
CCTAGGAAGAGGAAATAAATTAGCTTTAGAA

NCCACTAGCAAANNCACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATGAAA
AAGAAATGGAGTAAAAAGATATGCCTAACTGCGGAGCTTTGTTATCTTAA
ATTTGCTTCAGAATCTATAACAACACAAATCATATCATTATGATCACTTT
ACACCTGGGGTATTTACTGGACTTTTAAAGAATTATTTGTGTTCATTCTG
CTCATGAGAAAAAACACAAAGAATCCTTCCCCTGTTTTCATTGCTTATTT
ACTATGGCACTCAGCCTTAACCCATGTCCTCGTGTATAAAAAGGGGCTTA
TACACCTGTTGTGTATAGCTTTTGTTACCCCACCTTAACAGTGGGAATGG
GCTGCACTCAGAGAATATTGGATCCATGGATAAAACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACAGAGTTGT
TTAGTTTCAATTTGCTTTATTGGCACAATTGCTGGGTGTCCCCTAATCTA
CCTCCCCTATTGTTCCCTTCCTGGTACTTCCAGCTCAGCACCCTAAATCT
GTACTCAATTTCATTTGCTCAGCCACCTTCAGTCCAAGATCAACAGTCCC
AACCTCCTGCCTGTAGAAGGGGCCTGTGGCGGATTCACTAGAGATCTCAC
ATGGCTGC

Query= MSMg01no110_o24.g1 MSMg01no110_o24.g1 CHROMAT_FILE:
MSMg01no110_o24.g1 PHD_FILE: MSMg01no110_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:41 2005
         (573 letters)



>mm_chr12_98881412_98882387
          Length = 976

 Score =  741 bits (383), Expect = 0.0
 Identities = 452/489 (92%), Gaps = 25/489 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcatgaaaaagaaatggagtaaaaagatatgcctaactgcggagctttgttatcttaaat 60
           |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 467 tcatgaaaaagaaatggagtgaaaagatatgcctaactgtggagctttgttatcttaaat 408

                                                                       
Query: 61  ttgcttcagaatctataacaacacaaatcatatcattatgatcactttacacctggggta 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttgcttcagaatctataaccacacaaatcatatcattatgatcactttacacctggggta 348

                                                                       
Query: 121 tttactggacttttaaagaattatttgtgttcattctgctcatgag---aaaaaacacaa 177
           ||||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||
Sbjct: 347 tttactggagttttaaagaattatttgtgttcattctgctcatgagaaaaaaaaacacaa 288

                                                                       
Query: 178 agaatccttcccctgttttcattgcttatttactatggcactcagccttaacccatgtcc 237
           |||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 287 agaacccttcccctgttttcattgcctatttactatggcactcagtcttaacccatgtcc 228

                                                                       
Query: 238 tcgtgtataaaaaggggcttatacacctgttgtgtatagcttttgttaccccaccttaac 297
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tcatgtataaaaaggggcttatacacctgttgtgtatagcttttgttaccccaccttaac 168

                                                                       
Query: 298 agtgggaatgggctgcactcagagaatattggatccatggataaaacacacacacacaca 357
             ||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct: 167 tctgggaatgggctgcactcagagaatattggatccatggataaaacacacaca------ 114

                                                                       
Query: 358 cacacacacacacacacacacacacacacacacacacacacacagagttgtttagtttca 417
                        | ||||||||||||||||||||||||||||  ||||||| |||||||
Sbjct: 113 -------------a-acacacacacacacacacacacacacac--agttgttcagtttca 70

                                                                       
Query: 418 atttgctttattggcacaattgctgggtgtcccctaatctacctcccctattgttccctt 477
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 69  atttgctttattggcacaattgctgggtgtcccccaatctacctcccctattgttccctt 10

                    
Query: 478 cctggtact 486
           |||||||||
Sbjct: 9   cctggtact 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 976
Length adjustment: 10
Effective length of query: 563
Effective length of database: 966
Effective search space:   543858
Effective search space used:   543858
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)