Query= MSMg01no111_p15.b1 MSMg01no111_p15.b1 CHROMAT_FILE:
MSMg01no111_p15.b1 PHD_FILE: MSMg01no111_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:16:58 2005
(335 letters)
>mm_chr12_53469397_53470131
Length = 735
Score = 567 bits (293), Expect = e-166
Identities = 319/335 (95%), Gaps = 12/335 (3%)
Strand = Plus / Minus
Query: 1 aagttctgaataggactgaaagaccctgcctcaaagagtaatgtgaagcgattgaaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 aagttctgaataggactgaaagaccctgcctcaaagagtaatgtgaagcgattg------ 675
Query: 61 cgtcccaacatcaaccccaagccctcacatgcacaagcacacatactgaatgtacatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ------aacatcaaccccaagccctcacatgcacaagcacacatactgaatgtacatcag 621
Query: 121 tacctacagtgcactcaggtgcaaatgtacacacacatatacacatcatatgcacgcatg 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 620 tacctacagtgcactcaggtgcaaatgtacacacacatacacacatcatatgcacacatg 561
Query: 181 catacacatttcacatgcacactcatgagaagaatatgaaaataaccctatggaatttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catacacatttcacatgcacactcatgagaagaatatgaaaataaccctatggaatttat 501
Query: 241 atggaagaaggaaaatgcctgtcaggaatcccagtgaatctccttctgatacatttcttc 300
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 500 atggaagaaggaaaatgcctgtcaggaatcccaatgaatccccttctgatacatttcttc 441
Query: 301 ttcactaacatttcttctctattctctcatgtagc 335
|||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcactaacatttcttctctattctctcatgtagc 406
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_p15.g1 MSMg01no111_p15.g1 CHROMAT_FILE:
MSMg01no111_p15.g1 PHD_FILE: MSMg01no111_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:16:58 2005
(625 letters)
>mm_chr12_53256697_53257721
Length = 1025
Score = 1079 bits (558), Expect = 0.0
Identities = 600/614 (97%), Gaps = 2/614 (0%)
Strand = Plus / Plus
Query: 13 tattggctgtttctg-ttccctactcccaaagtccaaattccttatccccaaggagatgt 71
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tattggctgtttctgtttccc-actcccaaagtccaaattccttatccccaaggagatgt 271
Query: 72 ccaacagcgaaccactgtgagatacttcatttatacattgcagtttcacctatgcatatt 131
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 272 ccaacagcgaaccactgtgagatacttcatttatacattgcagtttcatctatgcatatt 331
Query: 132 caataaaaacaaccttgcagtcctggaattttgattattatatttatctccctgttttgc 191
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 caataaaagcaaccttgcagtcctggaattttgattattatatttatctccctgttttgc 391
Query: 192 tatttaactacttttacccacactaaaaaatgtagaccgttactcagcattacttaaaag 251
|||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 392 tattgagctacttttacccacactaaaaaatgtagaccgttactcatcattacttaaaag 451
Query: 252 agaccttcttttatcttttatggttaggcagtaatcatccttgcaagtcagttctgtagc 311
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 452 agaccttcttttatcttttatggttaggcaggaatcatccttgcaagtcagttctgtagc 511
Query: 312 atcaattgttgattataacttcctaacagttatagaaataaactagaatctggtttttct 371
||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 512 atcgattgctgattataacttcctaacagttttagaaataaactagaatctggtttttct 571
Query: 372 gtcgcatctccactgtcaggaaaatgaatgtgatgtagcactgatccagtaaagaacgta 431
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 572 gtcgcatctccactgtcaggaaaatgaatgcgatgtaggactgatccagtaaagaacgta 631
Query: 432 ggggagtttgagcatctcgctgtctagaaagctcgaacctggctgcaaagggtagacctc 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ggggagtttgagcatctcgctgtctagaaagctcgaacctggctgcaaagggtagacctc 691
Query: 492 catataactctcacatggtttcctcattctctctctacaagaactacctattctaatttt 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 catataactctcacatggtttcctcattctctctctacaagaactacctattctaatttt 751
Query: 552 gttttctatgatagcctttgagatatttgtatactgtggtcatggctttaatttttttcc 611
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 752 gttttctatgatagcctttgagatatttgtacactgtggtcatggctttaatttttttcc 811
Query: 612 ccactgatcatctt 625
||||||||||||||
Sbjct: 812 ccactgatcatctt 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
