Query= MSMg01no115_a07.b1 MSMg01no115_a07.b1 CHROMAT_FILE:
MSMg01no115_a07.b1 PHD_FILE: MSMg01no115_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:51 2005
(636 letters)
>mm_chr12_79648278_79649314
Length = 1037
Score = 1170 bits (605), Expect = 0.0
Identities = 626/633 (98%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgctgagaaca-taacatggactgtagcatggctctctgaagatgcctatctg 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgctgagaagaataacatggactgtagcatggctctctgaagatgcctatctg 264
Query: 64 tacacatgaaccaaaagaaaaaacgcgataggaatcatcccctgtaacttagtattgagc 123
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 tacacatgaaccaaaagaaaaaacgtgataggaatcatcccctgtaacttagtattgagc 324
Query: 124 ttcagattatgaggatagggttttgacaaaaaaggaaattttcaaagaataaaagcagta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttcagattatgaggatagggttttgacaaaaaaggaaattttcaaagaataaaagcagta 384
Query: 184 aagctaatctaaaattggatacttccaagtttgttcctagtactacttatttgtgaaaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aagctaatctaaaattggatacttccaagtttgttcctagtactacttatttgtgaaaac 444
Query: 244 taggcatccctcaaagaatatattcattctgaagagtaggacaaagaaaaggagatgcta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taggcatccctcaaagaatatattcattctgaagagtaggacaaagaaaaggagatgcta 504
Query: 304 gtaagacctgcaaatagttctttaaggaactgttgagtcaattatcatttgtgggctgtc 363
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 505 gtaagacctgcaaatagttctgtaaggaactgttgagtcaattatcatttgtgcgctgtc 564
Query: 364 tgacatatttgcctaaagtcatttgaatcaaattaaggctggttttagtgccattattac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgacatatttgcctaaagtcatttgaatcaaattaaggctggttttagtgccattattac 624
Query: 424 cataatatttcacagcaaaatcgtccaacttaaatacatcagacatataatgctataccc 483
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 625 cataatatttcacagcaaaatcgtccaacttaaatacatcagacatataatcctataccc 684
Query: 484 atggcagttccaaagcagttattaatcctcataattgcccttaatatttcaaacatttat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atggcagttccaaagcagttattaatcctcataattgcccttaatatttcaaacatttat 744
Query: 544 taggagtattgtttttatagtcaatgcttagcatcctttagagctctagtgagcgttcat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 taggagtattgtttttatagtcaatgcttagcatcctttagagctctagtgagcgttcat 804
Query: 604 cttatttcatatatgcgttgttactcaaaaata 636
|||||||||||||||||||||||| ||||||||
Sbjct: 805 cttatttcatatatgcgttgttacccaaaaata 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_a07.g1 MSMg01no115_a07.g1 CHROMAT_FILE:
MSMg01no115_a07.g1 PHD_FILE: MSMg01no115_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:20:51 2005
(517 letters)
>mm_chr12_79791170_79792087
Length = 918
Score = 957 bits (495), Expect = 0.0
Identities = 510/515 (99%), Gaps = 1/515 (0%)
Strand = Plus / Minus
Query: 1 acttcactcaggtccctaagttctagattcaagtgcttggtttggacagggtccaaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 acttcactcaggtccctaagttctagattcaagtgcttggtttggacagggtccaaagag 499
Query: 61 tattttggctcctcagaataaacacaaagtgtctgattctataatgagaatagtaactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tattttggctcctcagaataaacacaaagtgtctgattctataatgagaatagtaactgg 439
Query: 121 ctttggagactaggtgtagatgtgttggcaatgcataggaaaggcatcaggatacttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctttggagactaggtgtagatgtgttggcaatgcataggaaaggcatcaggatacttata 379
Query: 181 cagaagcagagcttaggctcatacttagctagaatgtgtgcacaggctctgggaacgggg 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cagaagcagagcttagggtcatacttagctagaatgtgtgcacaggctctgggaacgggg 319
Query: 241 gttgcatctaactggtcgttttcaggaaaaaagagactgtgtataggcccaagcaggtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gttgcatctaactggtcgttttcaggaaaaaagagactgtgtataggcccaagcaggtgc 259
Query: 301 cttgggtgctctgttgca-ttttttttttatttcgagtgccattttcatatggatagatt 359
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cttgggtgctctgttgcatttttttttttatttcgagtgccattttcatatggatagatt 199
Query: 360 tatttttcaataggttcttgctatggacttcaggttagcctcaaacttttagcaatgtgt 419
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tatttttcaataggatcttgctatggacttcaggttagcctcaaacttttagcaatgtgt 139
Query: 420 tgcttgagcctccagagttttgggattacaggaatgtgctaccatgcctggctctaatgg 479
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tgcttcagcctccagagttttgggattacaggaatgtgctaccatgcctggctctaatgg 79
Query: 480 acaatttctcatcggttcatagctctagcacactg 514
||||||||||||| |||||||||||||||||||||
Sbjct: 78 acaatttctcatctgttcatagctctagcacactg 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 918
Length adjustment: 10
Effective length of query: 507
Effective length of database: 908
Effective search space: 460356
Effective search space used: 460356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
