Query= MSMg01no115_i06.b1 MSMg01no115_i06.b1 CHROMAT_FILE:
MSMg01no115_i06.b1 PHD_FILE: MSMg01no115_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:29 2005
(338 letters)
>mm_chr12_99748663_99749400
Length = 738
Score = 615 bits (318), Expect = e-180
Identities = 330/334 (98%)
Strand = Plus / Plus
Query: 3 gaattctatatttgatctcagtaatccaaaccacaccctccatctctgtttcatgacagt 62
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 203 gaattctatatttgatctcagtaatccaaaccacaccttccatctttgtttcatgacagt 262
Query: 63 gtcatgcactctgaccaggaaatctaattttctctccgctggtcactccttccggactat 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 263 gtcatgcactctgaccaggaaatctaattttctctccactggtcactccttccggactat 322
Query: 123 agtgagatgcaataatatcgtttttccaacagatcacacaattcacagaaaacccttgct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agtgagatgcaataatatcgtttttccaacagatcacacaattcacagaaaacccttgct 382
Query: 183 caaggaaagccacttttaaacatgacacttgttagaagccctgtccctggtgctgtgcgg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caaggaaagccacttttaaacatgacacttgttagaagccctgtccctggtgctgtgcgg 442
Query: 243 agacagtgtacagctatccacaagcgcgaatgcttgcgtgcacatgaagcatcaatactt 302
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 443 agacagtgtacagctatccacaagggcgaatgcttgcgtgcacatgaagcatcaatactt 502
Query: 303 gaaggacaaacgcaatcccctgatgcttgattgg 336
||||||||||||||||||||||||||||||||||
Sbjct: 503 gaaggacaaacgcaatcccctgatgcttgattgg 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_i06.g1 MSMg01no115_i06.g1 CHROMAT_FILE:
MSMg01no115_i06.g1 PHD_FILE: MSMg01no115_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:29 2005
(383 letters)
>mm_chr12_99868385_99869168
Length = 784
Score = 723 bits (374), Expect = 0.0
Identities = 380/382 (99%), Gaps = 1/382 (0%)
Strand = Plus / Minus
Query: 1 caataatgtaaaaatagtgtcggatctttcagacttcatgggattagaaaattacataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 caataatgtaaaaatagtgtcggatctttcagacttcatgggattagaaaattacataga 523
Query: 61 caccatcacaaaataatttttctccacaatttaattgtatgtccggtaatgatatttaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 caccatcacaaaataatttttctccacaatttaattgtatgtccggtaatgatatttaaa 463
Query: 121 aaggagcagagtttcagtgttattataactagtatatagaacatgaatactataatcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaggagcagagtttcagtgttattataactagtatatagaacatgaatactataatcctc 403
Query: 181 aggcagcttttttggttgtttcttcttcatttatttacattaagatatgcactcactggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aggcagcttttttggttgtttcttcttcatttatttacattaagatatgcactcactggt 343
Query: 241 ttctaacattcctaacagataaatgtcatgtttaaaactcacagggctgcagggaggcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttctaacattcctaacagataaatgtcatgtttaaaactcacagggctgcagggaggcct 283
Query: 301 agacaagtcattttacctgggccctctctcaggcatcgcttcttccaacgcggacatttt 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 282 agacaagtcattttacctgggccctctctcaggcatcgcttcttccaatgcggacatttt 223
Query: 361 t-ctgtttcttgatatgacttt 381
| ||||||||||||||||||||
Sbjct: 222 ttctgtttcttgatatgacttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 784
Length adjustment: 9
Effective length of query: 374
Effective length of database: 775
Effective search space: 289850
Effective search space used: 289850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
