Query= MSMg01no116_n19.b1 MSMg01no116_n19.b1 CHROMAT_FILE:
MSMg01no116_n19.b1 PHD_FILE: MSMg01no116_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:14 2005
(575 letters)
>mm_chr12_107714583_107715555
Length = 973
Score = 1058 bits (547), Expect = 0.0
Identities = 568/575 (98%), Gaps = 2/575 (0%)
Strand = Plus / Plus
Query: 1 acaaattttaaaaggtgcctgcagcatgtctctttgtctcctggtgttttgtgtggatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaaattttaaaaggtgcctgcagcatgtctctttgtctcctggtgttttgtgtggatgt 260
Query: 61 tcacggagtttttccttctaaccaacaaccacaaatcttccttagaatgccatgtctcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacggagtttttccttctaaccaacaaccacaaatcttccttagaatgccatgtctcta 320
Query: 121 gttgctctcagtttcctttaaatctataagcaaatagcaataaatctgggagggaacgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 gttgctctcagtttcctttaaatctataagcaaatagcaataaatctgggagggaac-ta 379
Query: 181 tacatatttttacagtccccccatttctttcctctaaatttcttgaagaatttaacaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tacatatttttacagtccccccatttctttcctctaaatttcttgaagaatttaacaaag 439
Query: 241 atgccaccatgccgctggtcgcaatgggacaagttagaggggtcagggagggtgctatcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgccaccatgccgctggtcgcaatgggacaagttagaggggtcagggagggtgctatcc 499
Query: 301 cgtgctgccaaacacgggagcacccagattccagtatcagagagaaaaaaatgtaatata 360
| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 500 catgctgccaaacacgggagcacccagattccagtatcagagag-aaagaatgtaatata 558
Query: 361 atgttttaagagaaaccagaacaaatgcgaagacgtccacaatgaaccaaagatttaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atgttttaagagaaaccagaacaaatgcgaagacgtccacaatgaaccaaagatttaaat 618
Query: 421 tgtaaataaagatggaatcaggtctcgtccacttgctttcggaagaatgaactgggcacc 480
||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 619 tgtaaataaagatgggatcaggtcttgtccactggctttcggaagaatgaactgggcacc 678
Query: 481 agtctttctggtatgtcgagaatggtttagggaaatgccttgcaggtaatctattaggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 agtctttctggtatgtcgagaatggtttagggaaatgccttgcaggtaatctattaggca 738
Query: 541 aggcttattattttaagggctaaggtcacaggcac 575
|||||||||||||||||||||||||||||||||||
Sbjct: 739 aggcttattattttaagggctaaggtcacaggcac 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 973
Length adjustment: 10
Effective length of query: 565
Effective length of database: 963
Effective search space: 544095
Effective search space used: 544095
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no116_n19.g1 MSMg01no116_n19.g1 CHROMAT_FILE:
MSMg01no116_n19.g1 PHD_FILE: MSMg01no116_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:14 2005
(292 letters)
>mm_chr12_107844547_107845238
Length = 692
Score = 518 bits (268), Expect = e-151
Identities = 271/272 (99%)
Strand = Plus / Minus
Query: 21 gagagagagagagagagagagagagagagagagagagagagagaggccaacttataggag 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gagagagagagagagagagagagagagagagagagagagagagaggccaacttataggag 593
Query: 81 ttgcttttctctctttctaccttgtgagtcccagaaattgacctcaagtcatcagactta 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ttgcttttctctctttctaccttgtgagtcccagaaattgacctcaagtcatcagactta 533
Query: 141 atggcaggcacctttacctgctgagccatcttgctggctctccctgtgtctgtaacaagt 200
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 532 atggcaggcacctttacctgctgagccatcttgctggctctccctgtgtttgtaacaagt 473
Query: 201 atcctgaagtccaggaggatgtgtagcaagcgaggggaatgtgaggaaaggaaggcaagg 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 atcctgaagtccaggaggatgtgtagcaagcgaggggaatgtgaggaaaggaaggcaagg 413
Query: 261 gtcttgcaggaacagcaagcactgtaaggact 292
||||||||||||||||||||||||||||||||
Sbjct: 412 gtcttgcaggaacagcaagcactgtaaggact 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
