Query= MSMg01no119_f19.b1 MSMg01no119_f19.b1 CHROMAT_FILE:
MSMg01no119_f19.b1 PHD_FILE: MSMg01no119_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:29 2005
(320 letters)
>mm_chr12_62486508_62487227
Length = 720
Score = 588 bits (304), Expect = e-172
Identities = 316/320 (98%), Gaps = 1/320 (0%)
Strand = Plus / Plus
Query: 1 gaatttacatatgtattccctgtataatttctttgtatttcactacatttttgttactag 60
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 201 gaatttacatatgtattccctgtataatttctttgtattttaatacatttttgttactag 260
Query: 61 agaattacatcaaaatcccttctttttcccatttacaacttcttctcaagtactcatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaattacatcaaaatcccttctttttcccatttacaacttcttctcaagtactcatcct 320
Query: 121 ccaacttctagtataaccaacctctcgacttaatggttttttccctttttattattgtta 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 ccaacttctagtataaccaacctctcgacttaatggctttttccctttttattattgtta 380
Query: 181 ttagatgtaatctgtacttgcatgcaaaaatatgtaaactttatatataacatgctgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagatgtaatctgtacttgcatgcaaaaatatgtaaactttatatataacatgctgagt 440
Query: 241 ctggttgtgtgtgtgtttgtgtttgtgggtgtgtgcgttgcacgtgtgttttcaggattg 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 ctggttgtgtgtgtgtttgtgtttgtgggtgtgtgcgt-gcacgtgtgttttcaggattg 499
Query: 301 actactttgtattgaataac 320
||||||||||||||||||||
Sbjct: 500 actactttgtattgaataac 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_f19.g1 MSMg01no119_f19.g1 CHROMAT_FILE:
MSMg01no119_f19.g1 PHD_FILE: MSMg01no119_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:29 2005
(644 letters)
>mm_chr12_62514845_62515888
Length = 1044
Score = 953 bits (493), Expect = 0.0
Identities = 493/493 (100%)
Strand = Plus / Minus
Query: 152 gttttaaattattattttaatttatatgtatattttatatatgtacgtatctctgctacc 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 gttttaaattattattttaatttatatgtatattttatatatgtacgtatctctgctacc 985
Query: 212 ctcagatagcagaaggggcaactggtcagatgaaatgggtgttaaagacagttgttaagc 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 ctcagatagcagaaggggcaactggtcagatgaaatgggtgttaaagacagttgttaagc 925
Query: 272 ttctttgtgggttttgggagctgtatctgtatcctcaggcagagaagccagggctcttaa 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 ttctttgtgggttttgggagctgtatctgtatcctcaggcagagaagccagggctcttaa 865
Query: 332 gcactgaggtatttttccagtttcataaataagttattgaatattatctactaataacta 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gcactgaggtatttttccagtttcataaataagttattgaatattatctactaataacta 805
Query: 392 agtggagatttatatcaaaagatagtattactattcattttgattttgagtgtgatttat 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 agtggagatttatatcaaaagatagtattactattcattttgattttgagtgtgatttat 745
Query: 452 taaggccagtctgacttggagtctccatgagattgaagtccaatgttatagtcttctgaa 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 taaggccagtctgacttggagtctccatgagattgaagtccaatgttatagtcttctgaa 685
Query: 512 tgctgacactagcaaaatcaatactccaagtggctgatacacatggtgtttattccatat 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgctgacactagcaaaatcaatactccaagtggctgatacacatggtgtttattccatat 625
Query: 572 agatctctctatgtgtttgcttcagagtcccaatgtcatggcatgatgtttacaaaggaa 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agatctctctatgtgtttgcttcagagtcccaatgtcatggcatgatgtttacaaaggaa 565
Query: 632 taggataaaagac 644
|||||||||||||
Sbjct: 564 taggataaaagac 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
