Query= MSMg01no119_i11.b1 MSMg01no119_i11.b1 CHROMAT_FILE:
MSMg01no119_i11.b1 PHD_FILE: MSMg01no119_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:42 2005
(141 letters)
>mm_chr12_119652437_119652978
Length = 542
Score = 259 bits (134), Expect = 4e-74
Identities = 140/142 (98%), Gaps = 1/142 (0%)
Strand = Plus / Minus
Query: 1 ttttattttagtaa-atataatctggcctgatttgttccttaagaatgaagttccaaatc 59
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttttattttagcaacatataatctggcctgatttgttccttaagaatgaagttccaaatc 283
Query: 60 agactgtttcctctaaggtcagacctaagctgcgtggaagcacccagaaaggtgggggag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 agactgtttcctctaaggtcagacctaagctgcgtggaagcacccagaaaggtgggggag 223
Query: 120 gggctctctggtaccgcagagg 141
||||||||||||||||||||||
Sbjct: 222 gggctctctggtaccgcagagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 542
Length adjustment: 8
Effective length of query: 133
Effective length of database: 534
Effective search space: 71022
Effective search space used: 71022
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no119_i11.g1 MSMg01no119_i11.g1 CHROMAT_FILE:
MSMg01no119_i11.g1 PHD_FILE: MSMg01no119_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:42 2005
(305 letters)
>mm_chr12_119474875_119475579
Length = 705
Score = 582 bits (301), Expect = e-171
Identities = 304/305 (99%)
Strand = Plus / Plus
Query: 1 tcatgagtagtacttttcctgaaataataaagaatgcacaagaaaacatatacctattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatgagtagtacttttcctgaaataataaagaatgcacaagaaaacatatacctattat 260
Query: 61 attcaaactaatgatggttaaaaaaggaagtaggtaaaaactttagtttccaaatggtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcaaactaatgatggttaaaaaaggaagtaggtaaaaactttagtttccaaatggtct 320
Query: 121 gtttcaatagttatgattctgtgtaaatacgttctaaaaacatgaagtgtcttactaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttcaatagttatgattctgtgtaaatacgttctaaaaacatgaagtgtcttactaatg 380
Query: 181 tttaatctattagaataatccaattgctttccatatgaaacttttggccatctttcctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaatctattagaataatccaattgctttccatatgaaacttttggccatctttcctaa 440
Query: 241 taagacactgttctctaagacccttgcacaaacaatgaaatatattttcagtcagcattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 taagacactgttctctaagacccttgcacaaacaatgaaatatattttcagtcagtattt 500
Query: 301 gactg 305
|||||
Sbjct: 501 gactg 505
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 705
Length adjustment: 9
Effective length of query: 296
Effective length of database: 696
Effective search space: 206016
Effective search space used: 206016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
