Query= MSMg01no119_k17.b1 MSMg01no119_k17.b1 CHROMAT_FILE:
MSMg01no119_k17.b1 PHD_FILE: MSMg01no119_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:53 2005
(642 letters)
>mm_chr12_62548534_62549573
Length = 1040
Score = 1139 bits (589), Expect = 0.0
Identities = 629/643 (97%), Gaps = 4/643 (0%)
Strand = Plus / Plus
Query: 2 ggaattctgtgaaaattccctcctgattctacgaccacaatataatatctgtccttgcat 61
||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattctgtg-aaactcactcctgattctacgaccacaatataatatctgtccttgcat 260
Query: 62 tgtttccaaagtccaacctttttttgaaaaaataaaaaaaatctcatgaccacaacaaca 121
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 tgtttccaaaatccaacctttttttgaaaaaat-aaaaaaatctcatgaccacaacaaca 319
Query: 122 gaaatatgatacaataaatggatgctgtttacaaagtacttttagttaaagttaatctga 181
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 320 gaaatatgatacaataaatggatgctgtttacaatgtacttttagttaaagttaatctga 379
Query: 182 aaaattatggaataaaataaatggaacccatccctgcattgacttacacaaaacactgtg 241
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 380 aaaattatggaataaaataaatggagcccatccctgcattgacttacacagaacactgtg 439
Query: 242 atggtttcagtaagaaatactccccacaagctcatctcttcaaatacttgcgacacagtt 301
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 440 atggtttcagtaagaaatactccccacaagctcatctcttcaaatacttgggacacagtt 499
Query: 302 tgtagtgcctttttgagagaatttgagggaatttttgcatctgaagacatggctaacatg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgtagtgcctttttgagagaatttgagggaatttttgcatctgaagacatggctaacatg 559
Query: 362 gctaaactccacccccacagtttctggcaacagccaggtatgctcctccccacagttacc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gctaaactccacccccacagtttctggcaacagccaggtatgctcctccccacagttacc 619
Query: 422 tggcaacagccaggtaggcttggctcaccataaaaatggggtgcttgcccccccc--tgc 479
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 620 tggcaacagccaggtaggcttggctcagcataaaaatggggtgcttgcccccccccctgc 679
Query: 480 ctcttatgctgttgcctctctcttgcctcttgcccccttgagtcctctctctcccattcc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctcttatgctgttgcctctctcttgcctcttgcccccttgagtcctctctctcccattcc 739
Query: 540 cttcttctctctctacacgttcctgtggccagcccccacttctctgctctcttctctctg 599
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 740 cttcttctctctctacacgtgcccgtggccagcccccacttctctgctctcttctctctg 799
Query: 600 cctttctctgcttctactactttcttaactcccctacccatgc 642
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cctttctctgcttctactactttcttaactcccctacccatgc 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1040
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1030
Effective search space: 650960
Effective search space used: 650960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_k17.g1 MSMg01no119_k17.g1 CHROMAT_FILE:
MSMg01no119_k17.g1 PHD_FILE: MSMg01no119_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:26:53 2005
(278 letters)
>mm_chr12_62700126_62700803
Length = 678
Score = 522 bits (270), Expect = e-153
Identities = 276/278 (99%)
Strand = Plus / Minus
Query: 1 aatgagtggtgttcttggatctatacatttgttagaatatccatcaacttgtaatctctg 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aatgagtggtgttcttagatctatacatttgttagaatatccatcaacttgtaatctctg 419
Query: 61 tctgtatggtcagaaatacagatattaaatacatttagatctataactgcctgccaactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tctgtatggtcagaaatacagatattaaatacatttagatctataactgcctgccaactg 359
Query: 121 tttaagaaagattatatttgaatattcattttcttataaaataatttgaaaagttgtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tttaagaaagattatatttgaatattcattttcttataaaataatttgaaaagttgtgta 299
Query: 181 gagtcttcattttgtctgaaaccattctaaagcttttcagaatactgggtaaaaactgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gagtcttcattttgtctgaaaccattctaaagcttttcagaatactgggtaaaaactgta 239
Query: 241 agatgaatggtatggcttgtttatatcatctggacaca 278
||||||||||| ||||||||||||||||||||||||||
Sbjct: 238 agatgaatggtttggcttgtttatatcatctggacaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 678
Length adjustment: 9
Effective length of query: 269
Effective length of database: 669
Effective search space: 179961
Effective search space used: 179961
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
