Query= MSMg01no127_i04.b1 MSMg01no127_i04.b1 CHROMAT_FILE:
MSMg01no127_i04.b1 PHD_FILE: MSMg01no127_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:17 2005
(324 letters)
>mm_chr12_119358811_119359535
Length = 725
Score = 565 bits (292), Expect = e-165
Identities = 315/324 (97%), Gaps = 7/324 (2%)
Strand = Plus / Plus
Query: 5 gaattctgcttgtcctt--cctgatcagag-acaaaagcaaatgtcaatcagataacttt 61
|||||||||||| ||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcttg--cttttcctgatcagagtacaaaagcaaatgtcaatcagataacttt 262
Query: 62 aattatcactgcgacacctttccttaaaa-taaacaaacacaaacccagtatccaactca 120
|||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 263 aattatcactgcga-agctttccttaaaaataaacaaacacaaacccagtatccaactca 321
Query: 121 catcaaacaaaatacattttttccgtataagagtgacctctgcgttttggagtggcgaga 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 322 catcaaacaaaatacattttttccgtataagagtaacctctgcgttttggagtggcgaga 381
Query: 181 cctcatgtctgaccatggctgcaatcttcttggtggtttcccatctttcaggtaattcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cctcatgtctgaccatggctgcaatcttcttggtggtttcccatctttcaggtaattcct 441
Query: 241 gtgtaaagatgcaatggacttcagttcctgaaacgactcaaccacatgaggtcaaaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gtgtaaagatgcaatggacttcagttcctgaaacgactcaaccacatgaggtcaaaaatt 501
Query: 301 cttatttctttaatctgatccagg 324
||||||||||||||||||||||||
Sbjct: 502 cttatttctttaatctgatccagg 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 725
Length adjustment: 9
Effective length of query: 315
Effective length of database: 716
Effective search space: 225540
Effective search space used: 225540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no127_i04.g1 MSMg01no127_i04.g1 CHROMAT_FILE:
MSMg01no127_i04.g1 PHD_FILE: MSMg01no127_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:40:17 2005
(425 letters)
>mm_chr12_119552535_119553359
Length = 825
Score = 758 bits (392), Expect = 0.0
Identities = 407/412 (98%)
Strand = Plus / Minus
Query: 1 cactgtacttctcggggttgttggagggacgcatcccactctgtgacactgctagtaaag 60
|||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cactgtgcttctcggggtttttggagggacgcatcccactctgtgacactgctagtaaag 353
Query: 61 catctggtgcctgatgaagcccttgttccttgcaggctgttaattctgtgacatttccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 catctggtgcctgatgaagcccttgttccttgcaggctgttaattctgtgacatttccaa 293
Query: 121 atttactgtctgatgttctttctgatgccacctcccagtctacttttatcactgagccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 atttactgtctgatgttctttctgatgccacctcccagtctacttttatcactgagccac 233
Query: 181 agagctgaagctagcctgcttgccttttcacctcaagggacagactgtagtctcaatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 agagctgaagctagcctgcttgccttttcacctcaagggacagactgtagtctcaatgct 173
Query: 241 gccacttagcttgtgtgttattttaggcaaacctttcagcctctttggggtgctgtaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gccacttagcttgtgtgttattttaggcaaacctttcagcctctttggggtgctgtaaaa 113
Query: 301 tcaaggagtaaacatctgcacaagtgctttgtaaacagtatgcttgccccaccctgagca 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 112 tcaaggagtaaacatctgcacaagtgctttgtaaacagtatgcttgtttcaccctgagca 53
Query: 361 aggaactgtggctgagaacaggagacaagtttaattggttccattttgaaaa 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 aggaactgtggctgagaacaggagacaagtttaattggttccattttgaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
