Query= MSMg01no128_l18.b1 MSMg01no128_l18.b1 CHROMAT_FILE:
MSMg01no128_l18.b1 PHD_FILE: MSMg01no128_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:55 2005
(267 letters)
>mm_chr12_111735550_111736216
Length = 667
Score = 501 bits (259), Expect = e-146
Identities = 265/267 (99%)
Strand = Plus / Plus
Query: 1 gccagcttgcctgaggtcctggagcagttggtgacagaggccttgggctttctgactcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gccagcttgcctgaggtcctggagcagttggtgacagaggccttgggctttctgactcac 260
Query: 61 agttctgggctcacatgctccagacaggcatgggaagctgctcttgcaggttcctttatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttctgggctcacatgctccagacaggcatgggaagctgctcttgcaggttcctttatc 320
Query: 121 tcggggatctcggcagaggtgtctgctgcgtttaccgtggtgtatagtgcgggctcccga 180
||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 321 tcggggatctcggcagaggtgtctgctgcgtttacagtggtgtagagtgcgggctcccga 380
Query: 181 aacaggctggtcaatctgatggtgtcatctagaaaaaacacaagatgcagatcctggggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacaggctggtcaatctgatggtgtcatctagaaaaaacacaagatgcagatcctggggc 440
Query: 241 gggaaggtaaggctcttcccaaaggct 267
|||||||||||||||||||||||||||
Sbjct: 441 gggaaggtaaggctcttcccaaaggct 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_l18.g1 MSMg01no128_l18.g1 CHROMAT_FILE:
MSMg01no128_l18.g1 PHD_FILE: MSMg01no128_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:56 2005
(425 letters)
>mm_chr12_111875338_111876162
Length = 825
Score = 745 bits (385), Expect = 0.0
Identities = 415/429 (96%), Gaps = 8/429 (1%)
Strand = Plus / Minus
Query: 1 tctacttagtatttcccggctgtagatgacatggctaactgaagtcttggactgtggaac 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 625 tctacttagtatttcccggctgtagatgacatggctaactgaagtcttgaactgtggaac 566
Query: 61 gagggacacagctaaggagcacagacaggtgggtactcacattgggaggcaggctaaggc 120
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 565 gggggacacagctaaggagcacagacgggtgggtactcacattgggaggcaggctaaggc 506
Query: 121 gctctccattaggcagcgtcaggagcttgttgtcatccagcacggagttcaggttctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gctctccattaggcagcgtcaggagcttgttgtcatccagcacggagttcaggttctcca 446
Query: 181 cccactcggggtccacatcgccatcaaagacaatccactggcgtttctgcagctcacctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cccactcggggtccacatcgccatcaaagacaatccactggcgtttctgcagctcacctc 386
Query: 241 tcacattgtctatgatcctagtttacaaaataatttcacaggcttactcaagccagcttt 300
|||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||
Sbjct: 385 tcacattgtctatgatcctagtttacaaaaaaatttcaaaggcttactcaagtcagcttt 326
Query: 301 gaaatgccccccctccggatggatcctgttatttgtgtgaaca----ccccgactgcatg 356
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 gaaatgccccccctccggatggatcctgttatttgtgtgaacagagt----gactgcatg 270
Query: 357 cgcttggatcctacagtcccggaaatgcaaacatcaaacagggcaaacatactttctcag 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 cgcttggatcctacagtcccggaaatgcaaacatcaaacagggcaaacatactttctcag 210
Query: 417 cacgtgtgt 425
|||||||||
Sbjct: 209 cacgtgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
