Query= MSMg01no129_a11.b1 MSMg01no129_a11.b1 CHROMAT_FILE:
MSMg01no129_a11.b1 PHD_FILE: MSMg01no129_a11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:18 2005
(368 letters)
>mm_chr12_62471058_62471825
Length = 768
Score = 656 bits (339), Expect = 0.0
Identities = 345/347 (99%)
Strand = Plus / Plus
Query: 22 tattttttaatatactttattttcaggccgatgaagaaaatgtcaagttttcccataccc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 tattttttaatatactttattttcaggccgatgaagaaaatgtcaagttttcccataccc 281
Query: 82 aaactaaactattatccaactctcaaatatagctgtttattgtttgattcagttggcatg 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaactaaactattatccaactctcaaatatagctgtttattgtttgattcagttggcatg 341
Query: 142 aatgtaaagtagtgagcctctttgcacccatcctacctatttgtctatatagaagaatca 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aatgtaaagtagtgagcctctttgcacccatcctacctatttgtctatatagaagaatca 401
Query: 202 acatttagattgatggctgttttctcattggagacaatacaaattgtaaaatgctgtgga 261
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 402 acatttagattgatggctgttttctcattggagccaatacaaattgtaaaatgctgtgga 461
Query: 262 aattatgaataatcttgatcgttccaggtattaataaagaattcgcacatgttctgttat 321
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 462 aattatgaataatcttgatcgttccaggtattaataaagaattcgcacatgttctggtat 521
Query: 322 tttctaagggaataactagtgtagataataaaatactttcagtaaac 368
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tttctaagggaataactagtgtagataataaaatactttcagtaaac 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_a11.g1 MSMg01no129_a11.g1 CHROMAT_FILE:
MSMg01no129_a11.g1 PHD_FILE: MSMg01no129_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:18 2005
(238 letters)
>mm_chr12_62625944_62626580
Length = 637
Score = 424 bits (219), Expect = e-123
Identities = 231/235 (98%), Gaps = 1/235 (0%)
Strand = Plus / Minus
Query: 1 gagattcttaattcacaactactgaaaggatctgggaatatcctgcacatcaagagaacc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 434 gagattcttaattcacaactactgaaaggatctgggaagatcctgcacatcaagagaacc 375
Query: 61 ttggtacagaggtaaaggggttttggggaggaaaaaataaaagatctttgatagatgtgg 120
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 374 ttggtacagaggttaaggggttttgggga-gaaaaaataaaagatctttgatagatgtgg 316
Query: 121 ggggcggggaaacaaacaccggatctcacttcagtatctggagggttggctaccaaatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ggggcggggaaacaaacaccggatctcacttcagtatctggagggttggctaccaaatgg 256
Query: 181 tccgcagcaaccatagcctgaaggaaacatgaaccgttcttctctggcaccttca 235
||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 255 tccgcagcaaccatagcctgaaggaaacatgaaccgttcatctctggcaccttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 637
Length adjustment: 9
Effective length of query: 229
Effective length of database: 628
Effective search space: 143812
Effective search space used: 143812
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
