Query= MSMg01no129_d22.b1 MSMg01no129_d22.b1 CHROMAT_FILE:
MSMg01no129_d22.b1 PHD_FILE: MSMg01no129_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:35 2005
(306 letters)
>mm_chr12_84029175_84029882
Length = 708
Score = 522 bits (270), Expect = e-153
Identities = 297/306 (97%), Gaps = 2/306 (0%)
Strand = Plus / Plus
Query: 1 cttatgcacctccttaaaagtc-caagggaatgaaatttacccctccatg-cccctccct 58
|||||||||||||||| ||||| ||||||||||||||||||| |||||| ||||||| |
Sbjct: 201 cttatgcacctccttagaagtcacaagggaatgaaatttacctttccatgtcccctccat 260
Query: 59 cttgtacacctccaatcatcctacagatggtttctaagttgtctgctcattggcagcttt 118
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgtatacctccaatcatcctacagatggtttctaagttgtctgctcattggcagcttt 320
Query: 119 gtcttacagcccactctgccaccagctctggcttctaccccagatccagacaagttcatc 178
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 gtcttacagcccactctgccaccagctctggtttctaccccagatccagacaagttcatc 380
Query: 179 tctctggagcatccgtgtagccctcaggaatcatagccattttagggtgggccgtggccc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctctggagcatccgtgtagccctcaggaatcatagccattttagggtgggccgtggccc 440
Query: 239 actcgaagacaactttataagtcagttgtctccttccaccttgtgagttatcaaactcag 298
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actcgaagacaactttagaagtcagttgtctccttccaccttgtgagttatcaaactcag 500
Query: 299 gtaacc 304
||||||
Sbjct: 501 gtaacc 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 708
Length adjustment: 9
Effective length of query: 297
Effective length of database: 699
Effective search space: 207603
Effective search space used: 207603
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no129_d22.g1 MSMg01no129_d22.g1 CHROMAT_FILE:
MSMg01no129_d22.g1 PHD_FILE: MSMg01no129_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:35 2005
(293 letters)
>mm_chr12_84166238_84166923
Length = 686
Score = 468 bits (242), Expect = e-136
Identities = 269/282 (95%), Gaps = 7/282 (2%)
Strand = Plus / Minus
Query: 1 tctgtccctgcatgtatgacttggtaggaaaggatgcagccacctggttgccacttcccc 60
||||||||||||||| |||||||||||||| |||||||||||||||||||| | ||| ||
Sbjct: 475 tctgtccctgcatgtgtgacttggtaggaagggatgcagccacctggttgctaattctcc 416
Query: 61 ttcccaaacatggaagtttaaacagcaggcaaaacatctgtaaaacgctccagttacttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttcccaaacatggaagtttaaacagcaggcaaaacatctgtaaaacgctccagttacttg 356
Query: 121 ttttaaaagtcacttaaaccacctggatttctaaagacagtgtggtggccctagcctggg 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 355 ttttaaaagtcacttaaacca-------ttctaaagacagtgtggtggccctagcctggg 303
Query: 181 acaagaccctaaagattaatatcaatggcctcagttgggaaaagcaaaaactgcagaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 acaagaccctaaagattaatatcaatggcctcagttgggaaaagcaaaaactgcagaagg 243
Query: 241 gaaattatggatgactaagccagatcctgtgtgttctgatca 282
||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 242 gaaattatggatgacaaagccagatcctgtgtgttctgatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 686
Length adjustment: 9
Effective length of query: 284
Effective length of database: 677
Effective search space: 192268
Effective search space used: 192268
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
