Query= MSMg01no130_g15.b1 MSMg01no130_g15.b1 CHROMAT_FILE:
MSMg01no130_g15.b1 PHD_FILE: MSMg01no130_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:11 2005
(271 letters)
>mm_chr12_51798512_51799182
Length = 671
Score = 377 bits (195), Expect = e-109
Identities = 198/199 (99%), Gaps = 1/199 (0%)
Strand = Plus / Minus
Query: 73 cacacacacaccacacacacacacacacacacacacacacacacacacacacagagctct 132
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 cacacacaca-cacacacacacacacacacacacacacacacacacacacacagagctct 465
Query: 133 cctcctagtgagaattcaggtaaggacagctgttgctcttcccgccccccaccccccttg 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cctcctagtgagaattcaggtaaggacagctgttgctcttcccgccccccaccccccttg 405
Query: 193 gccttgtagaacctttaacatttcaaaggtgagtcactctttccttttttcttttcagat 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gccttgtagaacctttaacatttcaaaggtgagtcactctttccttttttcttttcagat 345
Query: 253 ttagctaggtccattttgt 271
|||||||||||||||||||
Sbjct: 344 ttagctaggtccattttgt 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 95
Number of extensions: 40
Number of successful extensions: 40
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space: 173444
Effective search space used: 173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no130_g15.g1 MSMg01no130_g15.g1 CHROMAT_FILE:
MSMg01no130_g15.g1 PHD_FILE: MSMg01no130_g15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:11 2005
(236 letters)
>mm_chr12_51667230_51667865
Length = 636
Score = 431 bits (223), Expect = e-125
Identities = 231/235 (98%), Gaps = 4/235 (1%)
Strand = Plus / Plus
Query: 1 ctcatcaccaaaatcttgcatttctttaactatgtaatgtcatatcctcattcataagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcatcaccaaaatcttgcatttctttaactatgtaatgtcatatcctcattcataagat 260
Query: 61 atgtgttcccaagtacattcattcaattgtttacatttttctcctctttgaattcagtaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtgttcccaagtacattcattcaattgtttacatttttctcctctttgaattcagtaa 320
Query: 121 gtggccactcatttttcacaagtacgcttacttttttctaagtgactgtaaaatttattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggccactcatttttcacaagtacgcttacttttttctaagtgactgtaaaatttattt 380
Query: 181 ccagttacctatc--attcatattattttcccacaatgacttcgcctttagtttt 233
||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagttacctatcgca--catattattttcccacaatgacttcgcctttagtttt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
