Query= MSMg01no130_k11.b1 MSMg01no130_k11.b1 CHROMAT_FILE:
MSMg01no130_k11.b1 PHD_FILE: MSMg01no130_k11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:33 2005
(195 letters)
>mm_chr12_75553657_75554251
Length = 595
Score = 311 bits (161), Expect = 1e-89
Identities = 186/199 (93%), Gaps = 9/199 (4%)
Strand = Plus / Plus
Query: 2 gaattcacttctttcttcc-----gtaactactcactgtacagagcattcaaagtaccct 56
|||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 201 gaattcacttcttt----caaaaagtaactactcactgtacagagcattcagagtaccct 256
Query: 57 atcacctagcctagacaggaacagggcagggcccatctactgcaggggtttcagatcccc 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atcacctagcctagacaggaacagggcagggcccatctactgcaggggtttcagatcccc 316
Query: 117 tggggccgtggtcctcaccttgtgggctacaacatctttggcgaacctctacctccaaaa 176
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tggggccgtggtcctcaacttgtgggctacaacatctttggcgaacctctacctccaaaa 376
Query: 177 atatttatttaatgattca 195
||||||| ||||||||||
Sbjct: 377 atatttacataatgattca 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no130_k11.g1 MSMg01no130_k11.g1 CHROMAT_FILE:
MSMg01no130_k11.g1 PHD_FILE: MSMg01no130_k11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:33 2005
(253 letters)
>mm_chr12_75694041_75694695
Length = 655
Score = 447 bits (231), Expect = e-130
Identities = 249/255 (97%), Gaps = 2/255 (0%)
Strand = Plus / Minus
Query: 1 cccttaaagtttgaaag-taacattttaggacaaataaaggtaattcaacttccttcatg 59
||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 455 cccttaaagtttgaaagttaacattttaggacaaataaaggtaattcaactttgttcatg 396
Query: 60 tggaaactaatccctaaatattaacaggtttgtattaactcatgagttgcagagtcgcga 119
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct: 395 tggaaactaatccctaaatattaacaggtttgtattgactcatgagttgcagagtcgtga 336
Query: 120 taaattactggctactaggatgtctaaaatagcaagaaatagccccagtctctaacaggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 taaattactggctactaggatgtctaaaatagcaagaaatagccccagtctctaacaggg 276
Query: 180 cttctcttggtctgtcttaacat-aattgaatggtaaaggtggtccaatataaagatttt 238
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 275 cttctcttggtctgtcttaacataaattgaatggtaaaggtggtccaatataaagatttt 216
Query: 239 cttagctatctcttt 253
|||||||||||||||
Sbjct: 215 cttagctatctcttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 655
Length adjustment: 9
Effective length of query: 244
Effective length of database: 646
Effective search space: 157624
Effective search space used: 157624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
