Query= MSMg01no130_m11.b1 MSMg01no130_m11.b1 CHROMAT_FILE:
MSMg01no130_m11.b1 PHD_FILE: MSMg01no130_m11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:45 2005
(182 letters)
>mm_chr12_15437460_15438040
Length = 581
Score = 329 bits (170), Expect = 7e-95
Identities = 179/182 (98%), Gaps = 1/182 (0%)
Strand = Plus / Minus
Query: 1 ttcttctacaggtatcaccacaattccatcttctcctgactgaaatgtctccattttaag 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 ttcttctacaggtatcaccacaattccaccttctcctgactgaaatgtctccattttaag 322
Query: 61 gaagctgtgttctgtaaattaagttagttaatgtctattacggctcatcattccaatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagctgtgttctgtaaattaagttagttaatgtctattacggctcatcattccaatgtt 262
Query: 121 tataaatatttacatatgtatattagtctatattgaaggtctgagcgaatcattttcttg 180
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 tataaatatttacatatgtatattagtctatattgaaggtctgag-aaatcattttcttg 203
Query: 181 tg 182
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 581
Length adjustment: 8
Effective length of query: 174
Effective length of database: 573
Effective search space: 99702
Effective search space used: 99702
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no130_m11.g1 MSMg01no130_m11.g1 CHROMAT_FILE:
MSMg01no130_m11.g1 PHD_FILE: MSMg01no130_m11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:44:45 2005
(173 letters)
>mm_chr12_15292158_15292734
Length = 577
Score = 294 bits (152), Expect = 2e-84
Identities = 169/176 (96%), Gaps = 4/176 (2%)
Strand = Plus / Plus
Query: 1 ttctctttgggaagcactttgaaaagtcaaaaaaaaaa--ttaaaagtcaggaaatattt 58
|||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 ttctctttgggaagcattttgaaaagtcaaaaaaaaaaaattaaaagtcaggaaatattt 260
Query: 59 aaacaagagtaatagccatgatttttaaaaagtaaataataaaacaa--tctttccagat 116
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 261 aaacaagagtaatagccatgatttttaaaaagtaaataataaaataagttctttccagat 320
Query: 117 taagccaatcagaaacgatgctgcttaccctcatgtatatacattagcctgcatta 172
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 taagccaatcagaaacgatgctgcttaccctcatgtacatacattagcctgcatta 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 173
Length of database: 577
Length adjustment: 8
Effective length of query: 165
Effective length of database: 569
Effective search space: 93885
Effective search space used: 93885
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
