Query= MSMg01no131_a02.b1 MSMg01no131_a02.b1 CHROMAT_FILE:
MSMg01no131_a02.b1 PHD_FILE: MSMg01no131_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:04 2005
(254 letters)
>mm_chr12_44648985_44649638
Length = 654
Score = 484 bits (250), Expect = e-141
Identities = 253/254 (99%)
Strand = Plus / Plus
Query: 1 gctgatgttgagtaaacaggagataactaaaatgcacattctagaagcctcatataatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gctgatgttgagtaaacaggagataactaaaatgcacattctagaagcctcatataatga 260
Query: 61 ggagaaatgagcaaaaatgttaaagaaaaattctaaaatatgtgaaaatctggggagagg 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagaaacgagcaaaaatgttaaagaaaaattctaaaatatgtgaaaatctggggagagg 320
Query: 121 aaaatatatctaggtttatgaagctcaaaagttcttaaaagaatctatctattgaaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatatatctaggtttatgaagctcaaaagttcttaaaagaatctatctattgaaataa 380
Query: 181 tcactagtatgtattataaaaaattgtcaaaactcaaggaacacattctgaaagcttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcactagtatgtattataaaaaattgtcaaaactcaaggaacacattctgaaagcttcaa 440
Query: 241 ggatgtgtcatata 254
||||||||||||||
Sbjct: 441 ggatgtgtcatata 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no131_a02.g1 MSMg01no131_a02.g1 CHROMAT_FILE:
MSMg01no131_a02.g1 PHD_FILE: MSMg01no131_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:04 2005
(343 letters)
>mm_chr12_44797901_44798643
Length = 743
Score = 621 bits (321), Expect = 0.0
Identities = 327/329 (99%), Gaps = 1/329 (0%)
Strand = Plus / Minus
Query: 16 caaggtttgtggtatttttgttaatacgatctttcttatctagcactaggcttttgtagt 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 caaggtttgtggtatttttgttaatacgatctttcttatctagcactaggcttttgtagt 684
Query: 76 ttgcaaaccttgagcttctgagaaaag-attatctacccttgtagggtaactccaatcaa 134
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 683 ttgtaaaccttgagcttctgagaaaagcattatctacccttgtagggtaactccaatcaa 624
Query: 135 atctttgcttttacatatttttgaagcttataaagtggtaggcttccacatgccattttc 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atctttgcttttacatatttttgaagcttataaagtggtaggcttccacatgccattttc 564
Query: 195 aaaaatccttggtgttattttgtattttttcctcacctttctctggcctatcctctcaac 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaaaatccttggtgttattttgtattttttcctcacctttctctggcctatcctctcaac 504
Query: 255 tgcctcctctcccagtcactgtatctgtgatctaccactttatctaaactcctctaaact 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgcctcctctcccagtcactgtatctgtgatctaccactttatctaaactcctctaaact 444
Query: 315 tcctaccaccctctacttccctgagttgt 343
|||||||||||||||||||||||||||||
Sbjct: 443 tcctaccaccctctacttccctgagttgt 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
