Query= MSMg01no131_d14.b1 MSMg01no131_d14.b1 CHROMAT_FILE:
MSMg01no131_d14.b1 PHD_FILE: MSMg01no131_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:22 2005
(456 letters)
>mm_chr12_44308827_44309681
Length = 855
Score = 843 bits (436), Expect = 0.0
Identities = 451/456 (98%), Gaps = 1/456 (0%)
Strand = Plus / Plus
Query: 1 tgctcttccctagagcatccagagcaagatttgtttgggggaactttgtttacaaattag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tgctcttccctagagcatccagagcaagatttgtttgggggaactttgttta-aaattag 259
Query: 61 atagttgttattttgtgtgatagttctatgtctcatattctcttacatcagtacacatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atagttgttattttgtgtgatagttctatgtctcatattctcttacatcagtacacatct 319
Query: 121 gatagagacattgtgattcatcataaacacatttactgaagcctttctctgtcacctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 320 gatagagacattgtgattcatcataaacacatttactgaagcctttctctgtcacttcca 379
Query: 181 agtgtttctttcctgctcaatatttaaatttaatttatccatttttatatttttacttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 agtgtttctttcctgctcaatatttaaatttaatttatccatttttatatttttacttaa 439
Query: 241 ccaacaagttacttctttacttatctgtgttgattttgatgttaagtctttataacatat 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 440 ccaacaagttacttctttacttatctgtgttgattttgatgttaaatctttataacatat 499
Query: 301 ttcacatagttgtctttcaactatagaaattcaacttcattatattgaggattcttctaa 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttcaaatagttgtctttcaactatagaaattcaacttcattatattgaggattcttctaa 559
Query: 361 attttgccatatttttatcttttattacatttttatttttatattttgtctatgtgtgtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 attttgccatatttttatcttttattacatttttatttttatattttgtctatgtgtgtt 619
Query: 421 tgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtg 456
|||||||||||||||| |||||||||||||||||||
Sbjct: 620 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 855
Length adjustment: 10
Effective length of query: 446
Effective length of database: 845
Effective search space: 376870
Effective search space used: 376870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_d14.g1 MSMg01no131_d14.g1 CHROMAT_FILE:
MSMg01no131_d14.g1 PHD_FILE: MSMg01no131_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:22 2005
(659 letters)
>mm_chr12_44454643_44455701
Length = 1059
Score = 1152 bits (596), Expect = 0.0
Identities = 644/660 (97%), Gaps = 2/660 (0%)
Strand = Plus / Minus
Query: 1 agggtataacaatatttcagtaatttttaatatgtaaagaaaatgtctttagaacagccc 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 agggtataacaacatttcagtaatttttaatatgtaaagaaaatgtctttagaacagccc 800
Query: 61 tgacaagcaaatgacaaagctgtgtgccaaaatctatgcaagaagcacataaaaacaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tgacaagcaaatgacaaagctgtgtgccaaaatctatgcaagaagcacataaaaacaaaa 740
Query: 121 taacctgaaagccaagtttatctgtggtacaaatacccctttacaaacttagaatcaaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 739 taacctgaaagccaagtttatctgtggtacaaatacccctttacaaacttggaatcaaaa 680
Query: 181 attgttagaggagttgccacaaatgttgaggccaatctattctcatctcaaaggacatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 679 attgttagaggagttgccacaaatgttgaggccaatctattctcatctcaaagaacatac 620
Query: 241 ttctgaaaaagtgttacaatcttgtgtttcagagcagaagcaaa-agaaacccccgtgtt 299
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 619 ttctgaaaaagtgttacaatcttgtgtttcagagcagaagcaaata-aaacccccgtgtt 561
Query: 300 ttagagctcctcacatatatgaacctagatttgaacaaaggagtaagaaaacaaagattg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttagagctcctcacatatatgaacctagatttgaacaaaggagtaagaaaacaaagattg 501
Query: 360 catgtgtgtgtgcacacacacaagggaggggagcaaaatttcaggctattaagacaaaga 419
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 catgtgtgtgtgtgcacacacaagggaggggagcaaaatttcaggctattaagacaaaga 441
Query: 420 aaacttacaagaaagaaacagaaaaagcataaattttataaaaaggaaaactgtacaaat 479
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 440 aaacttacaagaaagaaacagaaaatgcataaactttataaaaaggaaaactgtacaaat 381
Query: 480 gaaatttatcactagcaatagtgaagtacaatttctaattatgcatagaaaattaacttc 539
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 380 gaaatttatcactagcaatagtgaaatacaatttctaattatgcatagaaaattaacttc 321
Query: 540 taaaatgagtatgtaagagtttttcagctaagtaagctgagtaaatttcttatctcatct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 taaaatgagtatgtaagagtttttcagctaagtaagctgagtaaatttcttatctcatct 261
Query: 600 aacgaaagaaggaaaacaatcgtatgaagaatcaattccaataattaattattaatcaat 659
|||||||||||| |||||||| |||| |||||| ||| |||||||||||||||||||||
Sbjct: 260 aacgaaagaagggaaacaatcatatggagaatctattataataattaattattaatcaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
