Query= MSMg01no131_i09.b1 MSMg01no131_i09.b1 CHROMAT_FILE:
MSMg01no131_i09.b1 PHD_FILE: MSMg01no131_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:46 2005
(633 letters)
>mm_chr12_54175551_54176583
Length = 1033
Score = 1178 bits (609), Expect = 0.0
Identities = 628/635 (98%), Gaps = 3/635 (0%)
Strand = Plus / Plus
Query: 1 tttcattttattacaaa--tattcatgctgtaagctaccctttaggacttccttcttcat 58
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tttcattttattacaaagatattcatgctgtaagctaccctttaggacttccttcttcat 258
Query: 59 tcacgattataatgcaaagatcattcacagtgttggctgtggtaataatgtgcttccttt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcacgattataatgcaaagatcattcacagtgttggctgtggtaataatgtgcttccttt 318
Query: 119 gaatgctctacgtctccattttgaatatgtaaatatatctcatttaatccgaacagcaga 178
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 319 gaatgctctacgtctccattttgaatatgtaaatatatctcatttaatcctaacagcaga 378
Query: 179 cctatgaattagctatgaggatcttgatttgggttataggaagcagaggcaaagggaagt 238
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 379 cctatgaattagctatgaggatcttgatttgggttataggaatcagaggcaaagggaagt 438
Query: 239 taagttttgtgtgtccaaggtcatctttaatgagcaatgcagcattatattgaaatccag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 taagttttgtgtgtccaaggtcatctttaatgagcaatgcagcattatattgaaatccag 498
Query: 299 ggctgtctggctctaatgatctttggatgaattactgtgtaaaattgatcttaactgata 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggctgtctggctctaatgatctttggatgaattactgtgtaaaattgatcttaactgata 558
Query: 359 tttcctaagtattcttccatatcaggtgactcaaagggaaggacaggacagaaatacatt 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tttcctaagtattcttccatatcaggtgactcaaagggaaggacaggacagaaatacatt 618
Query: 419 tcattgtgtctttattgtagccttgttaccctcttcagtttttagccctaaaccatagct 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tcattgtgtctttattgtagccttgttaccctcttcagtttttagccctaaaccatagct 678
Query: 479 ttagctattgtacataaaatgtgtgtatgtcaaggttggtttgttgttgttgttgttgtt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttagctattgtacataaaatgtgtgtatgtcaaggttggtttgttgttgttgttgttgtt 738
Query: 539 ttctctatgggtgtcctttgccatcttttaagctgaaattctttaaacctttggagatcg 598
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 739 ttctctatgggtgtcctttgccatcttttaagctgaaactctttaaacctttggagatca 798
Query: 599 tggaaccctgatgtgttttctttatcacttgaaag 633
|||||||||||||||||| ||||||||||||||||
Sbjct: 799 tggaaccctgatgtgttt-ctttatcacttgaaag 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_i09.g1 MSMg01no131_i09.g1 CHROMAT_FILE:
MSMg01no131_i09.g1 PHD_FILE: MSMg01no131_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:47 2005
(233 letters)
>mm_chr12_54294391_54295023
Length = 633
Score = 422 bits (218), Expect = e-122
Identities = 230/234 (98%), Gaps = 2/234 (0%)
Strand = Plus / Minus
Query: 1 atgaaggaacactctccccacctctttcctcacagcatgtctcttagggaagcggatgac 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atgaaggaacactct-cccacctctttcctcacagcatgtctcttagggaagcggatgac 375
Query: 61 ctggagtttcctgttactggcctcaaatttagaccacactttagtgtgtaggccgtcctt 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctggggtttcctgttactggcctcaaatttagaccacactttagtgtgtaggccgtcctt 315
Query: 121 accttctttctgtgattgtaaataaagacgcgcccccc-accccccaatgagacgcttct 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 314 accttctttctgtgattgtaaataaagacgcgcccccccaccccccaatgagacgcttct 255
Query: 180 ctttccagcttttttattattcagaagagagacttttttcctcagaggaaacct 233
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 254 ctttccagcttttttattagtcagaagagagacttttttcctcagaggaaacct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
