Query= MSMg01no132_a15.b1 MSMg01no132_a15.b1 CHROMAT_FILE:
MSMg01no132_a15.b1 PHD_FILE: MSMg01no132_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:26 2005
(669 letters)
>mm_chr12_61441412_61442479
Length = 1068
Score = 963 bits (498), Expect = 0.0
Identities = 537/550 (97%), Gaps = 1/550 (0%)
Strand = Plus / Minus
Query: 1 taaacatgcttcataatcttgtttgtgagattttctcagaaaacaaccagaatgtggatg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 564 taaacatgcttcataatcttgtttgtcagattttctcagaaaacaaccagaatgtggatg 505
Query: 61 ataaaagaaggctggtaaggttaaacttagaagactcatgaatttggggcttgggcatag 120
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 504 ataaaagaaggctggtaaggttaaacttagaagactcatg-ttttggggcttgggcatag 446
Query: 121 ttcattagctgttctatattcttgtttgagatatctctcagaaatggaaccaccatgact 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct: 445 ttcattagctgttctatattcttgtttgaaatatctctcagaaatggaaccaccacaact 386
Query: 181 ctacgtgggcaagcattagagtacttactgccatatgaatcaaaatgtttgattctcagt 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctacgtgggcaagcattagaatacttactgccatatgaatcaaaatgtttgattctcagt 326
Query: 241 cagcagaagatagaaactagctttcagaggttcagggatatttgttacacattgcccccg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 325 cagcagaagatagaaactagctttcagaggttcagggatatttgttacacatcgcccctg 266
Query: 301 cattttctgtctctgtgctgtttgattgcttgcctgaaaacattttttatctttgttttc 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 265 cattttctgtctctgtgctgtttgattgcttgcctggaaacattttttatctttgttttc 206
Query: 361 ttaaatttattttaattctgagattactgtataattaaattatttctcccctctctttct 420
|||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||
Sbjct: 205 ttaaatttattttaattctgagattactgtataattaaatcattgcttccctctctttct 146
Query: 421 tccatataaacactctaatatgcccatccttgatctcttcaaattcatgtaataattttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tccatataaacactctaatatgcccatccttgatctcttcaaattcatgtaataattttc 86
Query: 481 attaattcttgttaaatatatatgcatatattatgcatataacacacacacacacacaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 attaattcttgttaaatatatatgcatatattatgcatataacacacacacacacacaca 26
Query: 541 cacacacaca 550
||||||||||
Sbjct: 25 cacacacaca 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1068
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1058
Effective search space: 697222
Effective search space used: 697222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_a15.g1 MSMg01no132_a15.g1 CHROMAT_FILE:
MSMg01no132_a15.g1 PHD_FILE: MSMg01no132_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:27 2005
(668 letters)
>mm_chr12_61299780_61300847
Length = 1068
Score = 1191 bits (616), Expect = 0.0
Identities = 652/664 (98%)
Strand = Plus / Plus
Query: 1 catggctctttaaaactgatatgttgaaatctaattgtgaggagtattggtattaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catggctctttaaaactgatatgttgaaatctaattgtgaggagtattggtattaaagga 260
Query: 61 ctgagtcataagaggttattaggctataaaacctactctcatcaataggaccagaaactg 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 261 ctgagtcataagaggttattaggctatagaacctactctcatcaataggaccagaaactg 320
Query: 121 tatttttgataaacagagacacacagaaatgtcttcattgaggaacaggccttcataaat 180
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 tatttttgataaacagagacacacagaaatgtcttcattgaggaataggccttcataaac 380
Query: 181 acctaatctgactatgaattgatcttggactttctggtgccttgaactgtgataaatgaa 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 acctaatctgactatgaattgatcttgaactttctggtgccttgaactgtgataaatgaa 440
Query: 241 tttgttgcttataatctacccagtttaaggtgtcttgctatataacaagacaaacagagt 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 tttgttgcttataatctacccagtttaaggtgtcttgatatataacaagacaaacagagt 500
Query: 301 acgccagggctggttcttgtgtgcagtgtaagacatcaggaaatcttattgttacatgca 360
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acgcctgggctgattcttgtgtgcagtgtaagacatcaggaaatcttattgttacatgca 560
Query: 361 gattcaaaggcaaagccacagcaacaaaactattcagatgagtatcaggagcccccaaga 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 561 gattcaaaggcaaagccacagcaacaaaactattcaaatgagtatcaggagcccccaaga 620
Query: 421 ctgtgtagaatgctatcaggaacaaatggaggaaagtccagagcctgatcatgtccttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgtgtagaatgctatcaggaacaaatggaggaaagtccagagcctgatcatgtccttcc 680
Query: 481 tcagtcaaaatattctacttcattaccccaagaattgtttctcaggcactgagaggtggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 tcagtcaaaatattctacttcattaccccaagaattgtttctcaggcactgagagatggt 740
Query: 541 catagaacctcaggttaccacaaagcagcagaaaccaacgcactctcttaatgcttcaac 600
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 741 catagaacctcaggttaccacaaagcagcagaaaccaatgcactctcttaatgcttcaac 800
Query: 601 aaggaatcctgcatattttctatacactgagaaaagtcatatgccctcctgaaattttat 660
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 801 aaggaatcctgcatattttctatacacagagaaaagtcatatgccctcctgaaatgttat 860
Query: 661 tcaa 664
||||
Sbjct: 861 tcaa 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
