Query= MSMg01no132_g17.b1 MSMg01no132_g17.b1 CHROMAT_FILE:
MSMg01no132_g17.b1 PHD_FILE: MSMg01no132_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:56 2005
(627 letters)
>mm_chr12_100958447_100959472
Length = 1026
Score = 1122 bits (580), Expect = 0.0
Identities = 611/624 (97%), Gaps = 6/624 (0%)
Strand = Plus / Plus
Query: 4 gaattcttaaaataatctctctgaatatttcatgccaaagtctctgaagtctgtaatggg 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gaattcttaaaataaactttctgaatatttcatgccaaagtctctgaagtctgtaatggg 268
Query: 64 tctggatagagtgatgataatttttcattcttttgaagtagagaaagagaaagaagggaa 123
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tctggatagagtaatgataatttttcattcttttgaagtagagaaagagaaagaaggga- 327
Query: 124 gagagagagagagagagaaaaaaaaaacccccacttctctgccccagggcagaaaccacg 183
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 328 ---agagagagagagagaaaaaaaaaa--cccacttctctgccccagggcagaaaccatg 382
Query: 184 ttgcagtgtgttgggttaaaatgactgcgtactatggaggctatctgtctgtttatatct 243
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 383 ttgcagtgtgttgggttaaaatgactgcgtactgcggaggctatctgtctgtttatatct 442
Query: 244 cttggtaaaatatacacagtgatttcatgctatacagcacacagagtgtaatgtcagatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cttggtaaaatatacacagtgatttcatgctatacagcacacagagtgtaatgtcagatc 502
Query: 304 tcttctaagggatttaaaaataatcacaggatcgcacatcactgactatgggatataaac 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tcttctaagggatttaaaaataatcacaggatcgcacatcactgactatgggatataaac 562
Query: 364 catctctttaataaaattagataattgaagagtcttcatattgcctaagtatttgattag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 catctctttaataaaattagataattgaagagtcttcatattgcctaagtatttgattag 622
Query: 424 ataaatagcactccctccctttctgctctgaattggtgtgtcggaactgtaaatctcaca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ataaatagcactccctccctttctgctctgaattggtgtgtcggaactgtaaatctcaca 682
Query: 484 gagtggataacccagaagtgtactactaagataaaatgcttctgatgatattttaaatgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gagtggataacccagaagtgtactactaagataaaatgcttctgatgatattttaaatgt 742
Query: 544 tttcatttgttcattgggccattggaagcctgtaggaaaagaaatcccttagcttatttt 603
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tttcattcgttcattgggccattggaagcctgtaggaaaagaaatcccttagcttatttt 802
Query: 604 ttttcctgtaaacaacctattgta 627
||||||||||||||||||||||||
Sbjct: 803 ttttcctgtaaacaacctattgta 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1026
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1016
Effective search space: 626872
Effective search space used: 626872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_g17.g1 MSMg01no132_g17.g1 CHROMAT_FILE:
MSMg01no132_g17.g1 PHD_FILE: MSMg01no132_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:56 2005
(620 letters)
>mm_chr12_101103736_101104755
Length = 1020
Score = 1145 bits (592), Expect = 0.0
Identities = 614/623 (98%), Gaps = 3/623 (0%)
Strand = Plus / Minus
Query: 1 tcattctgctacccatagt---ttgttgttgttattgttttgcttgtttgttttttaaag 57
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 1015 tcattctgctacccatagtttgttgttgttgttgttgttttgcttgtttgttttttaaag 956
Query: 58 acagagtctcatgctagcccaggctagcacttcaaactttgtgcatagttaaggatgacc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 acagagtctcatgctagcccaggctagcacttcaaactttgtgcatagttaaggatgacc 896
Query: 118 ctgaactcttgatccttcttcctgtacctcccaagtattggcattacagacccttatcac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 ctgaactcttgatccttcttcctgtacctcccaagtattggcattacagacccttatcac 836
Query: 178 catacctggcttcatagctctttttcaaaagaaggtcatggcagatgtctatgcagggtt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 catacctggcttcatagctctttttcaaaagaaggtcatggcagatgtctatgcagggtt 776
Query: 238 ctttggctatagagcttgcagatgaggtctagatacatgccctgggtttccctgcctcag 297
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ctttggctttagagcttgcagatgaggtctagatacatgccctgggtttccctgcctcag 716
Query: 298 cagcaactaagtaagggcagagttctaaggatgtgcttcgcttctagctggggacagtac 357
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 715 cagcaactaagtaagggcagagttctaaggatgtgcttcgcttctagttggggacagtac 656
Query: 358 ctgaatacccgggtcctattttccaagggcttgttcagagtcctcttggaagatgggtca 417
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ctgaatgcccgggtcctattttccaagggcttgttcagagtcctcttggaagatgggtca 596
Query: 418 tgtctgttagaagttcctcgtgaaaattaagaaaaattcaaggttgaaccaaagctattt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tgtctgttagaagttcctcgtgaaaattaagaaaaattcaaggttgaaccaaagctattt 536
Query: 478 aaaagtaggtataggatagctgggaggaaagttcatactggggaaattcaggggctgggg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aaaagtaggtataggatagctgggaggaaagttcatactggggaaattcaggggctgggg 476
Query: 538 gattctcacatgaggagcanaaaggtactactgacatttttacttttgacacccagtaag 597
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gattctcacgtgaggagcaaaaaggtactactgacatttttacttttgacacccagtaag 416
Query: 598 caagtgggtataagtaacagcca 620
|||||||||||||||||||||||
Sbjct: 415 caagtgggtataagtaacagcca 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
