Query= MSMg01no133_i06.b1 MSMg01no133_i06.b1 CHROMAT_FILE:
MSMg01no133_i06.b1 PHD_FILE: MSMg01no133_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:21 2005
(613 letters)
>mm_chr12_97722175_97723189
Length = 1015
Score = 1062 bits (549), Expect = 0.0
Identities = 595/611 (97%), Gaps = 2/611 (0%)
Strand = Plus / Minus
Query: 5 gaattcacactatatacccttgtattttaataaaatctagcttgtcaattttactaacaa 64
||||||||| |||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 699 gaattcacaatatagaagcttgcattttaataaaatctagcttgtcaattttactaacaa 640
Query: 65 tgagagaagggtgctctttctaaaatgtcatcatactaagaaatatatactatatcagca 124
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 639 tgagagaagggtgctatttctaaaatgtcctcatactaagaaatatatactatatcagca 580
Query: 125 aggattttatatatctacattttaggatatgcttccattcatgttatgactggtatgaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aggattttatatatctacattttaggatatgcttccattcatgttatgactggtatgaag 520
Query: 185 tgtatggcatagttcattaatttatttcatgtattctaacatcttttaacttttcatgga 244
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tgtatggcatagttcattgatttatttcatgtattctaacatcttttaacttttcatgga 460
Query: 245 tgtttttaatatttaattgagttacttgtatctttttgcctatatgtccagtagctgtaa 304
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 459 tgtttttaatatttaattgagttacttgtatctttttccctgtatgtccagtagctgtaa 400
Query: 305 agttatatttccaatctcttttactgctttatggcctcagacacaggtgatgtttaattt 364
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 399 agttatatttccaatctcttttactgttttatggcctcagacacaggtgatgtttaattt 340
Query: 365 attagctg--ttttttttctttgtgactgtatctttgaacatatttgattttacaaattt 422
|||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 339 attagctgttttttttttctttgcgactgtatctttgaacatatttgattttacaaattt 280
Query: 423 atttacagagaagtaaataaaataatagaagaatatatagagtaatataaatagaaaata 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atttacagagaagtaaataaaataatagaagaatatatagagtaatataaatagaaaata 220
Query: 483 tagaataaatagaaatagagtcaatttgttgaaaaacaaaaaacttgctgcgaaactgac 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 tagaataaatagaaatagagtcaatttgttgaaaaacaaaaaacttgctgcgaaactgac 160
Query: 543 tgaaactcttttgaatttgtatattgagtgatgaggaggtgatatagtgagagtattaac 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 159 tgaaactcttttgaatttgtatattgagtgatgaggaggtgatatagtgagagtatttac 100
Query: 603 tctcctatcca 613
||| |||||||
Sbjct: 99 tcttctatcca 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1015
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1005
Effective search space: 606015
Effective search space used: 606015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_i06.g1 MSMg01no133_i06.g1 CHROMAT_FILE:
MSMg01no133_i06.g1 PHD_FILE: MSMg01no133_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:21 2005
(250 letters)
>mm_chr12_97641717_97642366
Length = 650
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Plus
Query: 3 actaacgaaaacattttgttagctaaattgccatgagacaaaaatcagataggaataaat 62
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 actaacaaaaacattttgttagctaaattgccatgagacaaaaatcagataggaataaat 262
Query: 63 aacaaatatttcatgtatattgacattttggcatgccatcaaattagtttatgaggcatt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aacaaatatttcatgtatattgacattttggcatgccatcaaattagtttatgaggcatt 322
Query: 123 gaattttactcatattcttaatctcatccttcaattttgtcattttaattggctcatttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaattttactcatattcttaatctcatccttcaattttgtcattttaattggctcatttt 382
Query: 183 attggcaactaatctaatcagggagaagtttatacatgtgtttcatttttaagaatctaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 attggcaactaatctaatcagggagaagtttatacatgtgtttcatttttaagaatctaa 442
Query: 243 taactat 249
|||||||
Sbjct: 443 taactat 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
