Query= MSMg01no134_g10.b1 MSMg01no134_g10.b1 CHROMAT_FILE:
MSMg01no134_g10.b1 PHD_FILE: MSMg01no134_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:46 2005
(223 letters)
>mm_chr12_68158021_68158643
Length = 623
Score = 397 bits (205), Expect = e-115
Identities = 217/221 (98%)
Strand = Plus / Plus
Query: 1 gttacagagatttgatttctatattcttgaacctctataatgtaggatatccaaaagaaa 60
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 201 gttacagagatttgatttctatattcttgaacttctatgatgtaggatatccaaaagaaa 260
Query: 61 agtttaaaagaagcgaataatcccttgtattactttggggatttaaacataaatacaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtttaaaagaagcgaataatcccttgtattactttggggatttaaacataaatacaact 320
Query: 121 gaatttaaagatgctccccatactgcaccaaagttcatcatcaaagaacccaggcatata 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gaatttaaagatgctccccatactgcaccaaagttcatcatcaaagaacccaagcatata 380
Query: 181 taaacgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 221
||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaacgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no134_g10.g1 MSMg01no134_g10.g1 CHROMAT_FILE:
MSMg01no134_g10.g1 PHD_FILE: MSMg01no134_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:46 2005
(766 letters)
>mm_chr12_68288004_68289168
Length = 1165
Score = 1363 bits (705), Expect = 0.0
Identities = 738/749 (98%), Gaps = 1/749 (0%)
Strand = Plus / Minus
Query: 1 tctggaaaagcagacattgcttttaacgactcattcatctctgcaacccctaataatatt 60
|||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 748 tctggaaaagcagacattgcttgtaacgactaagtcatctctgcaacccctaataatatt 689
Query: 61 tatctatgaaattatttacagcttacatttaataacatatttgtgacataaatgatctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 tatctatgaaattatttacagcttacatttaataacatatttgtgacataaatgatctca 629
Query: 121 aatttaaaactcacctcaaatagaaaataaattgcacctaattagatatttttccgggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aatttaaaactcacctcaaatagaaaataaattgcacctaattagatatttttccgggca 569
Query: 181 tgtttaacgtacaggtgtctacacatgcttatatactatgtgatacactgctttaaaaaa 240
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 568 tgtttaacgtacaggtgtctacacatgcttatatactatgtgatacgctgcttt-aaaaa 510
Query: 241 aggctgccctggtgcagatggaaagaattcctttaaatcttgaagccctttcctttatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aggctgccctggtgcagatggaaagaattcctttaaatcttgaagccctttcctttatta 450
Query: 301 cagtgttgactgctgctgttaaagagttatccctgtgcttgatgtcaggcatgcagtagt 360
||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||
Sbjct: 449 cagtgttgactgctgctgttaaagaattatccctgtgcttgatgtcagacatacagtagt 390
Query: 361 aaataaaatagctatcatccagatcctaaaacactttattatgtagaaggctcgaaacaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 389 aaataaaatagctatcatccagatcctaaaacactttattatgtagaaggctcggaacaa 330
Query: 421 tagaaaataaaatacaaaggttgcacacgttggggacactgatgggggcagtgccgaggg 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 329 tagaaaataaaatacaaaggttgcacacattggggacactgatgggggcagtgccgaggg 270
Query: 481 atgatgagaatagctaggacagtgacccagaatagtttttagacagtcatgccattccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atgatgagaatagctaggacagtgacccagaatagtttttagacagtcatgccattccag 210
Query: 541 gagcatatgagaaataacagttattaatattatataccaagaactgggccaagctttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gagcatatgagaaataacagttattaatattatataccaagaactgggccaagctttttg 150
Query: 601 caagcatcatttcatttaatgttcacagtgttctatgacgtacacatttctgttatcttt 660
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 149 caagcatcatttcatttaatgttcacagtgttctatgacgtacagatttctgttatcttt 90
Query: 661 aaagagaaatgactgcaatcaggaaggttaaccaaatgcctaaccttattctgtataaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aaagagaaatgactgcaatcaggaaggttaaccaaatgcctaaccttattctgtataaaa 30
Query: 721 aggacagattccttttcaaagttagactg 749
|||||||||||||||||||||||||||||
Sbjct: 29 aggacagattccttttcaaagttagactg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 766
Length of database: 1165
Length adjustment: 10
Effective length of query: 756
Effective length of database: 1155
Effective search space: 873180
Effective search space used: 873180
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
