CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCACCTGACGAAACCAAATGGCTGAGAAGCACCTGAAAAAAATGCTC
AGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCC
ATCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGA
TGCTGGCGTGGATGTGGAGAAAGAGTAACACTCCTCCATTGTTGGTGGGA
TTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAA
AATTGGACATAGTACTACCGGAGGATCCTGCAATACCTCCCCTGGGCATA
TATCTAGAAGATGTTCCAACTGGTAAGAAGGACACATGCTTCACTATGTT
CATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCC
CCTCAACAGAGGAATGGATACAAATAATGTGGTACATTTACACAATGGAA
TACTACTCAGCTATTAAAAAGAGTGAATTTATGAAATTCCTAGGCAAATG
GATGAACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAAGA
ACTCAAATGATATGTACTCACTGATAAGGGGATATTAGCCCAGAAACTTA
GTATACCCGAGATATAAGATACAATTTGCAAAACACATGAAACTGAAGAA
CGAAGACCAAAGTGT

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTTTACCAAAAGAAATCTATAGAATTATGGTTTAGGGGAGTTCAC
AAGATCACCCTCTGATTGGAAATTAGAATATATAGCAAAGGCTGCTATAG
AGCTTCCCATGGCAAGGGAGTCAGCCAGCTTTACCTCAGTTTCACCAACA
GTCACCAGCAGAGAGAGGAGAATAAATGATTCATAGGGGAGAAAAATGGA
AGGACTCAAGATGTCCTAGTTTGGGCATATTGGCTTGGGGAAATTCTTGC
TAGAAGTAGGCATTCTATATAATTGGATACTGGGATTATATTTAGCTTCT
ATGTTTCATCTAAAGGTAATACCAGGGGCAAAAATTTAAGGAATCTATAT
AATTGATTAAATAGTGAAAATTTGGACTAATTCCTATTAAAAATCCTGTT
TTGGATTCTCCAGGGTTGTTGATTTAGTCTCTGAGTTAGGTTCTCATTTT
CTATATTGTAGGCTACTGTCCGTTACTGTCTCAGGCTCTCATTTACATAC
AAAGGTTATGTATTATTGATATTGTGAGCCATAGACACACCATAGTGTGT
CAGAAGAACAAGAGACACACACACTTCTGATAAATGAACGTGGTAGCATG
GGTCCATGTCTTCAGGAGTCTCCATCCTTCCATGGAGTCCCCACCTCCAG
AGACAGCCATTAGA

Query= MSMg01no135_a21.g1 MSMg01no135_a21.g1 CHROMAT_FILE:
MSMg01no135_a21.g1 PHD_FILE: MSMg01no135_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:04 2005
         (393 letters)



>mm_chr12_40413981_40414775
          Length = 795

 Score =  725 bits (375), Expect = 0.0
 Identities = 390/395 (98%), Gaps = 2/395 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attggatactgggattatatttagcttctatgtttcatctaaaggtaataccaggggc-a 59
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 595 attggatactgggattatatttagcttctatgtttcatctaaaggtaataccaggggcaa 536

                                                                       
Query: 60  aaaatttaaggaatctatataattgattaaatagt-gaaaatttggactaattcctatta 118
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 535 aaaatttaaggaatctatataattgattaaatagtggaaaatttggactaattcctatta 476

                                                                       
Query: 119 aaaatcctgttttggattctccagggttgttgatttagtctctgagttaggttctcattt 178
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aaaaacctgttttggattctccagggttgttgatttagtctctgagttaggttctcattt 416

                                                                       
Query: 179 tctatattgtaggctactgtccgttactgtctcaggctctcatttacatacaaaggttat 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tctatattgtaggctactgtccgttactgtctcaggctctcatttacatacaaaggttat 356

                                                                       
Query: 239 gtattattgatattgtgagccatagacacaccatagtgtgtcagaagaacaagagacaca 298
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gtattattgataatgtgagccatagacacaccatagtgtgtcagaagaacaagagacaca 296

                                                                       
Query: 299 cacacttctgataaatgaacgtggtagcatgggtccatgtcttcaggagtctccatcctt 358
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 catacttctgataaatgaacgtggtagcatgggtccatgtcttcaggagtctccatcctt 236

                                              
Query: 359 ccatggagtccccacctccagagacagccattaga 393
           |||||||||||||||||||||||||||||||||||
Sbjct: 235 ccatggagtccccacctccagagacagccattaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 795
Length adjustment: 9
Effective length of query: 384
Effective length of database: 786
Effective search space:   301824
Effective search space used:   301824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)