Query= MSMg01no135_p10.b1 MSMg01no135_p10.b1 CHROMAT_FILE:
MSMg01no135_p10.b1 PHD_FILE: MSMg01no135_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:12 2005
(659 letters)
>mm_chr12_7934078_7935136
Length = 1059
Score = 1243 bits (643), Expect = 0.0
Identities = 655/659 (99%)
Strand = Plus / Minus
Query: 1 aaatttccattattaccgaggcaactgcaatcggccctcaatgaaggcagctgtatgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 aaatttccattattaccgaggcaactgcaatcggccctcaatgaaggcagctgtatgaaa 800
Query: 61 ggtccttggtgtgttcctaccttctggtgagttggccaagaaagcctaaggaaagtttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ggtccttggtgtgttcctaccttctggtgagttggccaagaaagcctaaggaaagtttta 740
Query: 121 attaagcttttcgtgaactattctatatccaaagcccattcagcgttgtggttcagcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 attaagcttttcgtgaactattctatatccaaagcccattcagcgttgtggttcagcagc 680
Query: 181 cccagtcactttctgaactctttaacatctctgaaatataccagggagaaaatgacttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cccagtcactttctgaactctttaacatctctgaaatataccagggagaaaatgacttct 620
Query: 241 ctccaaactcctgatggggacagtaaacctgactttacacttgatagactgatcctaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctccaaactcctgatggggacagtaaacctgactttacacttgatagactgatcctaccc 560
Query: 301 ctgccccagagcctaaagagaaccccctggaatgtgatctttgagtagaacctgaaattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctgccccagagcctaaagagaaccccctggaatgtgatctttgagtagaacctgaaattc 500
Query: 361 cagcttaaacatgagatcctggaatagataccttaacatctgtttggtggacgctaactc 420
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 499 caggttaaacatgagatcctggaatagataccttaacatctgtttggtggacgctaacgc 440
Query: 421 tgggcaggtaaggtttgtgatttttgaatagagagggcctatggactgagtatcatgatc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tgggcaggtaaggtttgtgatttttgaatagagagggcctatggactgagtatcatgatt 380
Query: 481 tttgactcacatttgtgtattgaaactctaatgcttatggaggtagtgcttgtagacagg 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 379 tttgactcacatttgtgtattgaaactctaatgcctatggaggtagtgcttgtagacagg 320
Query: 541 tgttttggaggcagattaggataagataaagttctggaggcgaggatcacactctccgca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgttttggaggcagattaggataagataaagttctggaggcgaggatcacactctccgca 260
Query: 601 tgcacacacagaggtaacgtgagcttagactaagtgagaaagctgcctgcaagccaaca 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgcacacacagaggtaacgtgagcttagactaagtgagaaagctgcctgcaagccaaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_p10.g1 MSMg01no135_p10.g1 CHROMAT_FILE:
MSMg01no135_p10.g1 PHD_FILE: MSMg01no135_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:12 2005
(647 letters)
>mm_chr12_7755121_7756167
Length = 1047
Score = 1064 bits (550), Expect = 0.0
Identities = 608/648 (93%), Gaps = 33/648 (5%)
Strand = Plus / Plus
Query: 1 ttaggactcgtgtatatgggttgctatgtgatggggagggggacattaaaaggacaaatc 60
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaggactcgtgtagatgagttgctatgtgatggggagggggacattaaaaggacaaatc 260
Query: 61 cttttatatagtgaaaggaatattaaggaatgtgactgttgtaggctacggagatagctc 120
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 cctttatatagtgaaaggaatattaagaaatgtgactgttgtaggctacggagatagctc 320
Query: 121 agtgtgtgaagggccagttgcacaactgtggggctctgagttcagattcccagaatccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgtgtgaagggccagttgcacaactgtggggctctgagttcagattcccagaatccaa 380
Query: 181 aggaaactagacagacagagacaaaataccatgtatgtttctcacatactcactgggaga 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaaactagacagacagagacacaataccatgtatgtttctcacatactcactgggaga 440
Query: 241 tgggaggcatataaaggagagtccttagaagcttgcctgttgactggtctggcacacaca 300
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggaggcagagaaaggagagtccttagaagcttgcctgttgactggtctggcacacaca 500
Query: 301 gttgtgaaagacaccaaataaggtggaaggggagaccctgtgacctctatattgcagtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttgtgaaagacaccaaataaggtggaaggggagaccctgtgacctctatattgcagtat 560
Query: 361 atgcacagctgtgctgtcatgcatgtatgtgcaagcaatgtgtgtgaatacacacataca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgcacagctgtgctgtcatgcatgtatgtgcaagcaatgtgtgtgaatacacacataca 620
Query: 421 gagacagacagacagacagacagacagacagacagacagacagacagacagacaagaagc 480
|||||||||||||||||||||| ||||||
Sbjct: 621 gagacagacagacagacagaca--------------------------------agaagc 648
Query: 481 agagatttttt-ataagaaatataattttcttaaatgaacaggctatactcataaaccaa 539
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 agagatttttttataagaaatataattttcttaaatgaacaggctatactcataaaccaa 708
Query: 540 caactgtactctggtgaacggaaggtgtatttgtttctggacattcattaccatacatta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 caactgtactctggtgaacggaaggtgtatttgtttctggacattcattaccatacatta 768
Query: 600 caaaagcaatgatttaagatggggcagatctagcatgtcctacagtag 647
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 caaaagcaatgatttaagatggggcagatctagcatgtcctacagtag 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
