Query= MSMg01no135_p14.b1 MSMg01no135_p14.b1 CHROMAT_FILE:
MSMg01no135_p14.b1 PHD_FILE: MSMg01no135_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:13 2005
(652 letters)
>mm_chr12_111973916_111974965
Length = 1050
Score = 1207 bits (624), Expect = 0.0
Identities = 645/652 (98%), Gaps = 2/652 (0%)
Strand = Plus / Plus
Query: 1 cagtgctcttaactgctgagccatctctccagctcccagtgtaaatcttaaggcatagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtgctcttaactgctgagccatctctccagctcccagtgtaaatcttaaggcatagtg 260
Query: 61 gtcttttacttttttaagacaaagtttcagtatgtggccctttgtgggctgtgtagtact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcttttacttttttaagacaaagtttcagtatgtggccctttgtgggctgtgtagtact 320
Query: 121 caggacagccttaatgtctatctgtctcgccctcctaaatgctgaaattaaagcatatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggacagccttaatgtctatctgtctcgccctcctaaatgctgaaattaaagcatatgt 380
Query: 181 catcatactcagtagtatattggtctcatgggaaatttaatattatggttgaaggtcaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catcatactcagtagtatattggtctcatgggaaatttaatattatggttgaaggtcaat 440
Query: 241 atacttttttttctttttttgctggctgaggtgtcccctcccaaagtatattttccccca 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atacttttttttcagtttttgctggctgaggtgtcccctcccaaagtatattttccccca 500
Query: 301 ttaactagaaattcaaactgaattctttttagataattcaggctgctatttatccttcaa 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 ttaactagaaattcaaactgaattctttttagataattcaggctgttatttatccttcaa 560
Query: 361 gatgaccattataaacatgtttttggtacaaaatagcatagctatgggagcttgggatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatgaccattataaacatgtttttggtacaaaatagcatagctatgggagcttgggatta 620
Query: 421 tccactgaacaccccctagtatttttaagagttgtgatccatatttgcattttatggaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccactgaacaccccctagtatttttaagagttgtgatccatatttgcattttatggaaa 680
Query: 481 agacaaatttgcattcataggaaaagacaaataacaacaaaatgaaatttaaagtgcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agacaaatttgcattcataggaaaagacaaataacaacaaaatgaaatttaaagtgcatt 740
Query: 541 ctagggatgtattaagaagacttttaaagtcaggtgatggtggcacatgcctttgatcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctagggatgtattaagaagacttttaaagtcaggtgatggtggcacatgcctttgatcca 800
Query: 601 gaactcaaaaaaacacacacacacaaaaaaaaaaaaaccaccaaaaaaaaaa 652
|||||||||||||||| || | | ||||||||||||||||||||||||||||
Sbjct: 801 gaactcaaaaaaacac-caaa-agaaaaaaaaaaaaaccaccaaaaaaaaaa 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1050
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1040
Effective search space: 667680
Effective search space used: 667680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_p14.g1 MSMg01no135_p14.g1 CHROMAT_FILE:
MSMg01no135_p14.g1 PHD_FILE: MSMg01no135_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:13 2005
(399 letters)
>mm_chr12_112146951_112147749
Length = 799
Score = 729 bits (377), Expect = 0.0
Identities = 392/397 (98%)
Strand = Plus / Minus
Query: 1 aaaatctcactgacagtcttctttgagtgtgaaaaggacaaaggactcatggattttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 aaaatctcactgacagtcttctttgagtgtgaaaaggacaaaggactcatggattttatt 480
Query: 61 ccctggagctaagttacattagaatgatggtgacagaagaactcactgacattgtttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ccctggagctaagttacattagaatgatggtgacagaagaactcactgacattgtttcta 420
Query: 121 agggagaaggtgacagaatagattctggactcacaaagccttaatgtggtaacaagatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agggagaaggtgacagaatagattctggactcacaaagccttaatgtggtaacaagatac 360
Query: 181 tgaaagggcattttccctaaggatatgtaactacaaaaccacattacataagggagcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 359 tgaaagggcattttccctaaggatatgtaactacaaaaccacattacataaggaagcaaa 300
Query: 241 atatttagatatcttgccatgccatagcacaaatttaaaactgtgtaattttcctgcata 300
||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 299 atatttagagatcatgccatgccatagcacaaatttaaaactgtgtagttttcctgcata 240
Query: 301 gtctcaaaataaaactaatcattcagtatccactgcagcgtgtgtaagtatgtatgtgtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gtctcaaaataaaactaatcattcagtatccactgcagcgtgtgtaagtatgtatgtgtg 180
Query: 361 tgtgtgaactatgtatgtatgtatgtatgtgtgtgtg 397
|||||||||||||||||||||||||||||| ||||||
Sbjct: 179 tgtgtgaactatgtatgtatgtatgtatgtatgtgtg 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
