ATCTATNNCCCTCATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCCGCGGAATTCATAGTTCTATCATATAAACTCCCCTTCCCTATGCCTG
GGATTAGTACTAACTTTCTGTATACCTAGCCTGCCAGCAACAGAGACTGA
ATTTCATTTCTACATGTAAAATGATCCTGAAGAGATTAGATAAAGATTAG
AGATTCATGTGATTTTTGTTAGTTTAGTTTCCTGTTATTGTAATAAAGAC
CATGATGATCAACAGCAACTTGAAGTGGAAGTACTTCATCTTATAACTTA
TAGATCAGTCTATCATTGAGGCAAGTCAAGGCAGGAACTCAAAGAAGGAA
CTGAAGGAACTCAAAAATCATTTCCAGATGACTCCAGGTTAGGTAGGTAG
GTAGGTAGGTAGATAGATAGATACCCCCCCCCCNCCNNNCNNNCNCCNCC
CCNCCCNCCCCCCCCCCCCTTCCCCCCCTTTCCTTTTCTTTTCCTTTCTT
CCTTTCTCTTTTTTTTTCTCTCTTTCCCCCCCCTTCCCTTTTTCTTTTCC
TTTTTCCCCCCCCTTTTTTTCCCCCTCTTTTTCCCCCCCTTTTCNCCTTT
TTCTTCTTTNTCCCTTTTCCCTTCCTAACATCCTTATAAAATCATCTTCT
TACTTCACTAATTATCCTTTCACTCTTCCTCCTCCCCTCTATTCCTTTTC
CTCCCTTCTT

ACCTTACACCCGATGATGTGGGAGGCCTGGCGGCCGCCTGGATGCGGATT
GGGGGTGAACTATAGAAGTTTACGAAAAATTCCTCAGTTGAGAATTCTTT
CTTAAGCTCTGTACCCCATTTTTAATGGGGTTATTTTAATTTCTGGAGTC
CAGCTTTTTGAGCTCTTTGTATATATTGGATATTAGTCCCCTATCAGATT
TAGAATTGGTAAAAATCCTTTCCCAATCTGTTCGTGGCCTTTTTCTCTTA
TTGACAGTGTCTTTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCCCA
TTTGTCAATTCTAGATCTTACGCACATGCCTTTGCTGTTCTGTTTAGAAA
ATTTTCCCCTGTGCCCATATCTTCGAGGATTTTCCCCACTTTCTCCTCTA
TTAATTTCAATGTCTCTGATCATATGCGGAGGTCTTTGATACACTTAGAC
TGGAGCTTGGTACAAGGAGATAAAAATGGATCAATTCGCATTCTTCTACA
TGATAACCGCAGTTGTGCCAGCACCACTTGTTGAAAATGCTGTCTTTTTT
CCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCTAGTGACCATAGGTGT
GTGGATTCATTTCTGGGTCTTCAATTCTATTCCATTGATATACCTGTCTG
TCACTGTACCAGAACCATGCAGTTTTTAT

Query= MSMg01no136_m22.b1 MSMg01no136_m22.b1 CHROMAT_FILE:
MSMg01no136_m22.b1 PHD_FILE: MSMg01no136_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:18 2005
         (371 letters)



>mm_chr12_46975744_46976515
          Length = 772

 Score =  648 bits (335), Expect = 0.0
 Identities = 359/367 (97%), Gaps = 1/367 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatagttctat-catataaactccccttccctatgcctgggattagtactaactt 63
           ||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaattcatagttctataaatataaactccctttccctatgcctgggattagtactaactt 264

                                                                       
Query: 64  tctgtatacctagcctgccagcaacagagactgaatttcatttctacatgtaaaatgatc 123
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 tctgtatacctagcctgccagcaacagagactggatttcatttctacatgtaaaatgatc 324

                                                                       
Query: 124 ctgaagagattagataaagattagagattcatgtgatttttgttagtttagtttcctgtt 183
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 ctgaagagattagataaagattagagattcacgtgatttttgttagtttagtttcctgtt 384

                                                                       
Query: 184 attgtaataaagaccatgatgatcaacagcaacttgaagtggaagtacttcatcttataa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attgtaataaagaccatgatgatcaacagcaacttgaagtggaagtacttcatcttataa 444

                                                                       
Query: 244 cttatagatcagtctatcattgaggcaagtcaaggcaggaactcaaagaaggaactgaag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttatagatcagtctatcattgaggcaagtcaaggcaggaactcaaagaaggaactgaag 504

                                                                       
Query: 304 gaactcaaaaatcatttccagatgactccaggttaggtaggtaggtaggtaggtagatag 363
           ||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 505 gaactcaaacatcatttccagatgactccaggttaggtaggtaggtagatagatagatag 564

                  
Query: 364 atagata 370
           |||||||
Sbjct: 565 atagata 571


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 772
Length adjustment: 9
Effective length of query: 362
Effective length of database: 763
Effective search space:   276206
Effective search space used:   276206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)