GTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATGCGCG
GAATTCTTAAGAAGTACCCAAGAAAAAAATGATAGAAACTTGTGGATAGT
ATTTTTTTTATCTATATATAAAACAAGAATTAATTAAAATTGGGATGCAT
AGGAAATGATGTAAGTAGACATATCATAATGTCTCTTTATTCCTTTTTTA
TAAATGAATTAAATGAAGATTGATGTAAACCAGATACATGAATGAGATAA
CTTTACAATACTTCCTACATGTTAGATTTTATAAATTTTATACTTAAGTA
CATACAAAAAGAAAAGCTTGTTTTACTATACTATCTTTGTAAATATTTTC
ATTACTAAACTCGTATGCAAGTCACTTACTGTTCTTTGAGAATGATGATG
CTACTTTTATGTGATATTTTTAACCAAGCAAAATAAACTTTACAATATTT
AACATGCAGGTTGAATAATTATATTTGGATTGGACCTTTTCAATCCCTCC
ATCACTCATATAGAGTCACACAGTGTACTTTAATATCTTATAAAAAAAAT
AAGTTGTGTATGGCTATTCATGACAAGAAAACCAATGCTGGGGAGGTTGT
GACAATAGGATCCTGAGTTAGTAGAAAGCCTGGGTGTCATTCCAAATTCA
ATGACAATCTAAGCTATCAAGTCTGAGGTTATCTCAAATGCAGCAAATAG
GAAAACTACTACATATTTGACCAGAGA

TGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTGTTTAGTTCTATACCCCATTTTTTGATTGG
TTTCTTGGTAGATAGCTTCTTGAGTACTTTATATATTTTGGATATTAGCC
TTCTATCAGATTTGGGGTTAGTAAAGACTTTTTCCCAAACTGTAGGTTGC
CAATTTGTCCTAATGACTATGTTCTTAGTCTTACAGAATCTTTCCAGTTC
CATTAGGTCCCATTTATCAATTCTTTCCTTTTTTGGGGGGGGGGATTTAT
TTGGCTTACATTTCCACAGTACTGTTCATTATCCACCAGAATCTCAAAAC
AGGGCAGGGACTAAAGGCAAGAGCTGATGCAATTCTTGATCTTAGTGTCT
GAGCCATTGGAGTTCTGTTTCGGAAATTTCGCTCTGTGCCAGTGAGTTCT
GGGCTCTTTCTTACTTTCTCTTCTACTAGATTTAGTGTATCTGGTTTTAT
GTTGACATCTTTAATCCAGTTGGACTTGAGCTTTGCGCAAGGTGACAAAT
CTGGATCTATTTTCATTTTTTCACATACAGATTGGAAGTTAGACCAGCAT
CATTTATTGAATATGCTTTCTTTTGTCCATTGCATATTTTTGGCATTTTT
GACACAGATTAAATGTCCTTGAGTGCGTGGTTTATTTCTAGATCCTCAGC
TCTATTC

Query= MSMg01no137_l08.b1 MSMg01no137_l08.b1 CHROMAT_FILE:
MSMg01no137_l08.b1 PHD_FILE: MSMg01no137_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:30 2005
         (605 letters)



>mm_chr12_64239882_64240886
          Length = 1005

 Score = 1050 bits (543), Expect = 0.0
 Identities = 588/607 (96%), Gaps = 10/607 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   gaattcttaagaagtaccca----agaaaaaaatgatagaaacttgtggatagtattttt 58
           |||||||||||||| |   |    ||||||||||||||||||||||||||||||  ||||
Sbjct: 894 gaattcttaagaagga---aaaatagaaaaaaatgatagaaacttgtggatagt-gtttt 839

                                                                       
Query: 59  tttatctatatataaaacaagaattaattaaaattgggatgcataggaaatgatgtaagt 118
           ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 ttta--tatatataaaacaagaattaattaaaattgggatgcataggaaatgatgtaagt 781

                                                                       
Query: 119 agacatatcataatgtctctttattccttttttataaatgaattaaatgaagattgatgt 178
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 780 agacatatcataatgtctcttttttccttttttataaatgaattaaatgaagattgatgt 721

                                                                       
Query: 179 aaaccagatacatgaatgagataactttacaatacttcctacatgttagattttataaat 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 aaaccagatacatgaatgagataactttacaatacttcctacatgttagattttataaat 661

                                                                       
Query: 239 tttatacttaagtacatacaaaaagaaaagcttgttttactatactatctttgtaaatat 298
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 660 tttatacttaagtacatacaaaaagaaaagcttgttttacaatactatctttgtaaatat 601

                                                                       
Query: 299 tttcattactaaactcgtatgcaagtcacttactgttctttgagaatgatgatgctactt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 tttcattactaaactcgtatgcaagtcacttactgttctttgagaatgatgatgctactt 541

                                                                       
Query: 359 ttatgtgatatttttaaccaagcaaaataaactttacaatatttaacatgcaggttgaat 418
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttaggtgatatttttaaccaagcaaaataaactttacaatatttaacatgcaggttgaat 481

                                                                       
Query: 419 aattatatttggattggaccttttcaatccctccatcactcatatagagtcacacagtgt 478
           |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||
Sbjct: 480 aattatatttggattggaccttttcaatccctccatcactcacatagagtcaaagagtgt 421

                                                                       
Query: 479 actttaatatcttataaaaaaaataagttgtgtatggctattcatgacaagaaaaccaat 538
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 actttaatatcttattaaaaaaataagttgtgtatggctattcatgacaagaaaaccaat 361

                                                                       
Query: 539 gctggggaggttgtgacaataggatcctgagttagtagaaagcctgggtgtcattccaaa 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gctggggaggttgtgacaataggatcctgagttagtagaaagcctgggtgtcattccaaa 301

                  
Query: 599 ttcaatg 605
           |||||||
Sbjct: 300 ttcaatg 294


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)