CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTTATAAAATTTGCATATTAGCACCCTATTGGATGTGAGATTAAGGAA
GATTAAGGAAGATTTTTTTTCCCAATCTGTAGGTTGCCAATTTGTCTTAT
TAACTATGTCCTTTGCCTTACAGAAGCTTTCTAGTTTAAGGAGATACAAT
TTATCAATTCTTGATCTTAGATCATGAGCCCTTGGAGTTCTGTTTAAGAC
ATTTCCCTCTGTGCCAGTGAGTTCAAGGCTCTTTCCCACTTTTTTTTTCT
ATTAGATTCAGTGTATCTGGTTTTATGTTGAGGTCAGTCATCTACTTGGA
TTTGAGTTTTGTGCAAGGTGACACATATGGATCTATTTTCACTTTTCTAC
ATACAGATAGCCAGTTAAACCAGCACCATTTATTGAAGATTCTTTATTAT
TTCCACTATATATTTTGGCTTTTTTTTTTGTCAAAGATCAAGTGTGTGAT
TTTATTCCTGGGACTTCAATTCTATTCCACTGATCAACATGTCTGTCTCT
GTACCAAAATCATACAGTTGTTATCACTATTGTCTGTAGTAGAGCTCAAG
TTCAGAGATGGTGATTCCCCTAGCTGTTCTTTTACTGTTAAGAATTGTTT
TCATATTTGTCAAGCACCAACAGAGCCTCTCAGGAGACAGCTATATCAGG
CTCCTATCTGCAAGCTCTTGTTGC

AATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCATTCCATAGATATTGAAAAACAGAATAT
GAAAAGATGGAGTAGGCAATTATGAAAAGTGAAATAAAAACTAATAGACA
AAATGAGACCCTGTAGAACTGGTTATTTATAGCCAATCAATGATTTCTTT
TAAGCCAAATACCTAATTCAAATAAATAGTGTTAAGTAAAACATTACATA
TCATGGTTTAAATGTTAGGGTTTAAACAGGGGTTTCTGGGGTTGATAATC
TGTTTTAAAGTTTTCTATACATACATCCTGAGACAACATTTGATAGTAAG
TAATTATTTGGAAATCAGTTCTTCAAAAAGAAAGTATATTCTTGAATTTT
ACAGGTACTTTAAGTTCAACTCACAGATGTGAAGATTCAAACTAGGATCT
ACATGTAATGAAAACATGCAATGTATTTCTTTCTAGGCTGAAGTTATTTT
CTTCATTATTTGCCACTTCAGCTCATTTACCACAAAAATTCATAAACTCA
TTTTGATTATAGATGAATAAAACTACATAACACATAGCTGTCATATTTTC
ATTACTTAGTCACCAGTAGATGGACACCTAGGCTGTTTTCATGTCCTAAG
TTATTATATACAGAGAGAAGTAATAAACATCAGTGAGATTAAGACTCTAT
AGTAGACATTAGGACCCTTT

Query= MSMg01no139_b21.g1 MSMg01no139_b21.g1 CHROMAT_FILE:
MSMg01no139_b21.g1 PHD_FILE: MSMg01no139_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:24 2005
         (649 letters)



>mm_chr12_44570915_44571959
          Length = 1045

 Score =  891 bits (461), Expect = 0.0
 Identities = 503/517 (97%), Gaps = 4/517 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattccatagatattgaaaaacagaatatgaaaagatggagtaggcaattatgaaaagtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 cattccatagatattgaaaaacagaatatgaaaagatggagtaggcaattatgaaaagtg 454

                                                                       
Query: 61  aaataaaaactaatagacaaaatgagaccctgtagaactggttatttatagccaatcaat 120
           ||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 453 aaatacaaactaatagacaaaatgagaccctgtagaactgg-tatttatggccaatcaat 395

                                                                       
Query: 121 gatttcttttaagccaaatacctaattcaaataaatagtgttaagtaaaacattacatat 180
            |||| ||||||||||||| |||| ||||||||||| || ||||||||||||||||||||
Sbjct: 394 -attt-ttttaagccaaatgcctatttcaaataaat-gtattaagtaaaacattacatat 338

                                                                       
Query: 181 catggtttaaatgttagggtttaaacaggggtttctggggttgataatctgttttaaagt 240
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 catggtttaaatgtttgggtttaaacaggggtttctggggttgataatctgttttaaagt 278

                                                                       
Query: 241 tttctatacatacatcctgagacaacatttgatagtaagtaattatttggaaatcagttc 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 277 tttctatacatacatcctgagacaacatttgatagtaagtaattatttggaaatcaattc 218

                                                                       
Query: 301 ttcaaaaagaaagtatattcttgaattttacaggtactttaagttcaactcacagatgtg 360
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 217 ttcaaaaagaaagtatattcttgaattttacaggtactttaagtccaactcacagatgtg 158

                                                                       
Query: 361 aagattcaaactaggatctacatgtaatgaaaacatgcaatgtatttctttctaggctga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 aagattcaaactaggatctacatgtaatgaaaacatgcaatgtatttctttctaggctga 98

                                                                       
Query: 421 agttattttcttcattatttgccacttcagctcatttaccacaaaaattcataaactcat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  agttattttcttcattatttgccacttcagctcatttaccacaaaaattcataaactcat 38

                                                
Query: 481 tttgattatagatgaataaaactacataacacatagc 517
           |||||| |||| |||||||||||||||||||||||||
Sbjct: 37  tttgataatagctgaataaaactacataacacatagc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1045
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1035
Effective search space:   661365
Effective search space used:   661365
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)