Query= MSMg01no139_c08.b1 MSMg01no139_c08.b1 CHROMAT_FILE:
MSMg01no139_c08.b1 PHD_FILE: MSMg01no139_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:26 2005
(636 letters)
>mm_chr12_62752491_62753526
Length = 1036
Score = 1108 bits (573), Expect = 0.0
Identities = 614/633 (96%), Gaps = 10/633 (1%)
Strand = Plus / Plus
Query: 4 ctattactcttcactcattttgtgatgtggctttgaatgatgcaactcccctcaagccac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctattactcttcactcattttgtgatgtggctttgaatgatgcaactcccctcaagccac 263
Query: 64 ccatatccatgtaaattacttcactaaactcatatggtatcagataaaaacaaatactaa 123
||| |||| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 264 ccagatccttgtaaattacttcactaaactcatatggtatcagctaaaaacaaatattaa 323
Query: 124 ttgcattttcaaatccaaatctgacttctgatattaacattactttcatcctttagtcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttgcattttcaaatccaaatctgacttctgatattaacattactttcatcctttagtcaa 383
Query: 184 aaaattcagtcaaaccataatatgatatattacctgtcatcagtttatacaatattgttc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaaattcagtcaaaccataatatgatatattacctgtcatcagtttatacaatattgttc 443
Query: 244 tatgaaatacagagaatatcttagtgagaaattttttcaatttcagcatttcttatcttt 303
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 444 tatgaaatacagagaatatcttagtgagaccttttttcaatttcagcatttcttatcttt 503
Query: 304 gttaaatagtgcttaagcatactttgattctgaaattaatacacaggatatgggatttat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gttaaatagtgcttaagcatactttgattctgaaattaatacacaggatatgggatttat 563
Query: 364 taagttgaaggtagtctttgtaatttatgcactacagttttagttctagagaatagacca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taagttgaaggtagtctttgtaatttatgcactacagttttagttctagagaatagacca 623
Query: 424 aaattgcaactcccctagctgggcatggtgacacacttctttaatcccagcactcaggag 483
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 624 aaattacaactcccctagctgggcatggtggcacacttctttaatcccagcactcaggag 683
Query: 484 gcagaggcaggtggatttcccgagttcgaggccagcctgttctacaaagttagttccagg 543
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gcagaggcaggtggatttcccaagttcgaggccagcctgttctacaaagttagttccagg 743
Query: 544 acagccagggctataaagagaagccctgtctccagaaacaaaaacaaaaacaaaaacaaa 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acagccagggctataaagagaagccctgtctccagaaacaaaaacaaaaacaa------- 796
Query: 604 aacaaaaacaaaaacaaccctcccttaagtgta 636
||||||||||||||||||||| |||||||||
Sbjct: 797 --caaaaacaaaaacaaccctcc-ttaagtgta 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_c08.g1 MSMg01no139_c08.g1 CHROMAT_FILE:
MSMg01no139_c08.g1 PHD_FILE: MSMg01no139_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:26 2005
(625 letters)
>mm_chr12_62897701_62898725
Length = 1025
Score = 768 bits (397), Expect = 0.0
Identities = 418/425 (98%)
Strand = Plus / Minus
Query: 201 agaactttatttttgttcctttccttatatcagaccttaacaaggcagatgtggccactg 260
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 1025 agaactttatttttgttcctttccttgtaccagaccttaacaaggcagatgtggccactg 966
Query: 261 ttaagtgtaccaaatctagtggatttaatctgatgtcaaagtagtagggaataagctaca 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 ttaagtgtaccaaatctagtggatttaatctgatgtcaaagtagtagggaataagctaca 906
Query: 321 gcaatgactcacaaaaggctagaagaacacaactgtcacaatgggaagtacaggaaagca 380
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 905 gcaatgactcacaaaaggctagaagaacacaactgccacaatgggaagcacaggaaagca 846
Query: 381 atgcctggaacagtctgaccttggtgtcagctagttaatgatgctgtttccagaatgaaa 440
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 atgcctgaaacagtctgaccttggtgtcagctagttaatgatgctgtttccagaatgaaa 786
Query: 441 tagaaatagatcagaagcctattaagttttactttgatcttcataagcagaaaaactcta 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tagaaatagatcagaagcctattaagttttactttgatcttcataagcagaaaaactcta 726
Query: 501 acataagtgaaagaaagctatatttgatcagagaaacggagaatcatgtcacattaacaa 560
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 acataagtgaaaaaaagctatatttgatcagagaaacggagaatcatgtcacattaacaa 666
Query: 561 attgtgcgagaacttgagcttgtaacagctccagaacaccttgtgtgatgccaagtccaa 620
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 attgtgcaagaacttgagcttgtaacagctccagaacaccttgtgtgatgccaagtccaa 606
Query: 621 gtcac 625
|||||
Sbjct: 605 gtcac 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
