CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAAT
TCTCTGCATTATCCTTTGTGAGTTTTCTATAAGCCTTCCAAAACAGTACA
AATAATATTTTAAAACTTCTATCATAGAATAGAAGAGGATAAAAGTTACA
CACACACACACACACACACACACACACACACACACACACACACACACACA
CATACACACACCACTGCCAAGAAATACAAAGAAACCTTAAAAGGCCAGGG
TCTGTTTACAAAGCTGCAATAGGCATTGTGATGGTGTAACCAATATGCCC
AGGATATAGGCTACAGGAAACAAAATTGCTTAAATGTAGAGGTGTATATT
TTCTTTGCACTTGCTTAAAAATGAACAACTTAATGCTGATAAGAAGTACA
CTCTTGTTTTACCATTCACACCCATGAAACTTTGATTTTTCTATCATATT
TTCTCTTTTCCTAAGGGATGATATATCCTTTTATAAAATCTCATACATCC
ATGGATTGATATGATGCAAAATATAGCACATTGATCCCAAAGTATTGATG
ACAAATCTAATCCTCATGAGTTACTATGAGTAAACTTTCCTTCCTAGAAT
TAAGCGGTGGTGAAGTATTTCTGGTGAATCAGTATTGCTATTCAGATTGG
CCTGCCTGCATGGATTCCAAAGCGTTTGCTTCTAATACTTTAACATTCAC
AAAAAAATCTAGAGA

AATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTACCATCATCATGA
GATATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGTCCT
GGATTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTCCTG
GCTTCTGTTAGTAGGATTCTTACGTTTACCTTTCGCCATCTGGCAATCTC
TGGAGTTAGTTGTTATAGTTGTCTTTGTTAAAAGATTGTTCCTCTGTTGA
TTTTGTTACCCTCTATCAGCAGGCGTGGGAGACAAGCTCTCTTCTCTGAG
TTTCAGTGGTCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGGGAA
GGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAAGGC
CCAAAACAGGATCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGG
CCAGTTGTCTGGAGTCGAAGATGTCGCAGCCTCAGAAGCTCTGTGGCTCT
TGCCGGGAAGGTGGCTGGTTGTCTGGAGCTGAGGATGGTGCCGCCCCAGA
ATCTCTGCGACTCTCTCGCCCGTCCCAGATTCAGCTGGCACTCTGTATTC
CATACGTTCACCCGTGCCGCCTGCTTTCTGTGTAATCCCGCAGTCTAGAT
TGTTCCTGCCGGA

Query= MSMg01no139_h18.b1 MSMg01no139_h18.b1 CHROMAT_FILE:
MSMg01no139_h18.b1 PHD_FILE: MSMg01no139_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:54 2005
         (589 letters)



>mm_chr12_99107625_99108613
          Length = 989

 Score =  996 bits (515), Expect = 0.0
 Identities = 570/593 (96%), Gaps = 12/593 (2%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattctctgcattatccttt----gtgagttttctataagccttccaaaacagtacaaa 61
           ||||||||||||||||  |||    |||||||||||||||||||||||||||||||||||
Sbjct: 200 gaattctctgcattat--tttttttgtgagttttctataagccttccaaaacagtacaaa 257

                                                                       
Query: 62  taatattttaaaacttctatcatagaatagaagaggataaaagttacacacacacacaca 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 taatattttaaaacttctatcatagaatagaagaggataaaagttacacacacacacaca 317

                                                                       
Query: 122 cacacacacacacacacacacacacacacacacacacaca----tacacacaccactgcc 177
           ||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 318 cacacacacacacacacacacacacacacacacacacacacacatacacacaccactgcc 377

                                                                       
Query: 178 aagaaatacaaagaaaccttaaaaggccagggtctgtttacaaagctgcaataggcattg 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aagaaatacaaagaaaccttaaaaggccagggtctgtttacaaagctgcaataggcattg 437

                                                                       
Query: 238 tgatggtgtaaccaatatgcccaggatataggctacaggaaacaaaattgcttaaatgta 297
           |||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||||
Sbjct: 438 tgatggtgtaaccaatatgcccaggatagaggttacaagaaacaaaattacttaaatgta 497

                                                                       
Query: 298 gaggtgtatattttctttgcacttgcttaaaaatgaacaacttaatgctgataagaagta 357
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaggtgtatattttctttacacttgcttaaaaatgaacaacttaatgctgataagaagta 557

                                                                       
Query: 358 cactcttgttttaccattcacacccatgaaactttgatttttctatcatattttctcttt 417
           |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 558 cactcttgttttaccatttacacccatgaaactttgatttttctatcatattttctctat 617

                                                                       
Query: 418 tccta-agggatgatatatccttttataaaatctcatacatccatggattgatatgatgc 476
           ||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 618 tcctagagg-atgatatattcttttataaaatctcatacatccatgggttgatatgatgc 676

                                                                       
Query: 477 aaaatatagcacattgatcccaaagtattgatgacaaatctaatcctcatgagttactat 536
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 677 aaaatatagcacattgatcccaaactattgatgacaaatctaatcctcatgagttactat 736

                                                                
Query: 537 gagtaaactttccttcctagaattaagcggtggtgaagtatttctggtgaatc 589
           ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 737 gagtaaactttccttcctagaattaagtggtggtgaagtatttctggtgaatc 789


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space:   566841
Effective search space used:   566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)