Query= MSMg01no142_g16.b1 MSMg01no142_g16.b1 CHROMAT_FILE:
MSMg01no142_g16.b1 PHD_FILE: MSMg01no142_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:03 2005
(682 letters)
>mm_chr12_101592716_101593797
Length = 1082
Score = 1226 bits (634), Expect = 0.0
Identities = 668/682 (97%), Gaps = 6/682 (0%)
Strand = Plus / Plus
Query: 1 aacacagatcccttaagtattactgtag---gcctttcatttggactatgcccctagcca 57
|||||||||||||||||||||||||||| || |||||||||||||||| |||||||
Sbjct: 201 aacacagatcccttaagtattactgtaggaagc---tcatttggactatgccactagcca 257
Query: 58 gtttctaaaaagatgctaagactcgccattggggctgggaggagaggggaatgaaagaca 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gtttctaaaaagatgctaagactcgccattggggctgggaggagaggggaatgaaagaca 317
Query: 118 cccatgacttggaggcttcgtcagccccagggaagcatgaagtcccagcattctatcttg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 cccatgacttggaggcttcgtcagccccagggaagcatgaagtcccagcattctatcttg 377
Query: 178 tggagaacagggcacgggagagtgacagagtctatgtcagagtcacgcacatgagagaag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tggagaacagggcacgggagagtgacagagtctatgtcagagtcacgcacatgagagaag 437
Query: 238 gctctgatttgcagatacccatgagaacatgaaacaaagcaggcaccactggcctcttac 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gctctgatttgcagatacccatgagaacatgaaacaaagcaggcaccactggcctcttac 497
Query: 298 ctgggattggtaaggttgtagcaggttttccatatctgtagcatgtgcttacaggtgagc 357
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 498 ctgggattggtaaggttgtagcaggatttccatatctgtagcatgtgcttacaggtgagc 557
Query: 358 agcgcctcatctgggccccggcagagtgactccaacttcactttggaaaacagtagtcta 417
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agcgcctcatccgggccccggcagagtgactccaacttcactttggaaaacagtagtcta 617
Query: 418 cagtgggagacaagggagaaagcacacagctcagcccagaggccgccttgcaaactacgt 477
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 618 cagtgggaaacaagggagaaagcacacagctcagcccagaggccgccttgcaaactacat 677
Query: 478 aagaggctcagtctgcagcagggggcaactgcgctcattttattttaattttcattgtaa 537
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 678 aagaggctcagtctgcggcagggggcaattgcgctcattttattttaattttcattgtaa 737
Query: 538 attgatttttctatacactatatcctgaccacagtttccctccctcagctcctcccaggt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 attgatttttctatacactatatcctgaccacagtttccctccctcagctcctcccaggt 797
Query: 598 ccgtcccacctatccaaatccaccctctttctttctctcaatctcattagaaaacaacaa 657
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 798 ccgtcccacctatccaaatccactctctttctttctctcaatctcattagaaaacaacaa 857
Query: 658 caaacaggcatctaaagaatta 679
||||||||||||||||||||||
Sbjct: 858 caaacaggcatctaaagaatta 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no142_g16.g1 MSMg01no142_g16.g1 CHROMAT_FILE:
MSMg01no142_g16.g1 PHD_FILE: MSMg01no142_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:02:04 2005
(398 letters)
>mm_chr12_101746709_101747505
Length = 797
Score = 687 bits (355), Expect = 0.0
Identities = 387/401 (96%), Gaps = 7/401 (1%)
Strand = Plus / Minus
Query: 1 ccagccccttatcacagctccttccctcttcccgagtgtcctttgtgcccccc---actc 57
||||||||||||||||| ||||||||||||| ||||||||||||||| || ||||
Sbjct: 597 ccagccccttatcacagttccttccctcttcacgagtgtcctttgtg----ccaggactc 542
Query: 58 agggtctctatctcttcacaggccatggtacttgaggatggacccaacatgggctttgac 117
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 541 agggtctctatctcttcacaggtcatggtacttgaggatggacccaacatgggctttgac 482
Query: 118 tcctctgggagatcctgtcagctctctctgggtgggtctgacttgagtatgtggagctgg 177
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tcctctgggagatcctgtcaactctctctgggtgggtctgacttgagtatgtggagctgg 422
Query: 178 cttcctgagaaggtcgtttcctagactctgggctagcctgataacatcctctggcctgtg 237
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttcctgagaaggtcatttcctagactctgggctagcctgataacatcctctggcctgtg 362
Query: 238 gttgcttcctgtcctcagagctccggagaaggctagatcaaccctaggcaactggcttac 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 361 gttgcttcctgtcctcagagctccggagaaggctagatcaaccctaggcaactggtttac 302
Query: 298 gggttttcttttgtttcttgagttgattttctccagcggaagtatgtgttcacaatcatg 357
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 301 gggttttcttttgtttcttgagttgagtttctccagcggaagtatgtgttcacaatcatg 242
Query: 358 tggtgtgtgagtatgtgtattagaaaggaaatatgagcaag 398
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggtgtgtgagtatgtgtattagaaaggaaatatgagcaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 797
Length adjustment: 9
Effective length of query: 389
Effective length of database: 788
Effective search space: 306532
Effective search space used: 306532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
