BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-142M19.T7 (MSMg01no142_m19.b1) | MSMg01-142M19.TJ (MSMg01no142_m19.g1) |
ACC | AG347315 | AG347316 |
length | 1,231 | 1,205 |
length of high quality (start - end) | 579 (121 - 699) | 59 (341 - 399) |
definition | CHROMAT_FILE: MSMg01no142_m19.b1 PHD_FILE: MSMg01no142_m19.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:02:56 2005 | CHROMAT_FILE: MSMg01no142_m19.g1 PHD_FILE: MSMg01no142_m19.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:02:56 2005 |
singlet/doublet | singlet | --- |
---|
BLAST hit | unique | no hit data |
---|
sequence | NCCATATTNNNNNNCTCAATGGGCGCTAAGACTCCTAAGGGAGAGGATCC
GCGGAATTCATACTACTATTAACTACCCTATAAATATGAAGTGGGTAGGT
CACAGGCCCTTGGGACACCTCATTTAGCTGAGTGCCCGAAGGATTAAACT
GTCCCATAATTACTTATCCTAATTGTCATGGACCAAAGCAGCTCTAAATG
CTCATTGGAGAAGCACATTGTTTTTTCAGTAGGTAGCAGTGAATACTAAG
ACTCACAACTGGTCAAAATGCAGTGACTGCATTGTATTAAATGGGGGATT
TATATCAGACCCTTCCCAGAAGGCTCAGGGATCATCTCAGAAGTGGGAGC
AGAACAGCGTTAGCAGACAGAGGTAGTAGAATACTGTAGTGAGATAGGGT
TTTCTGTATTTGAAAACACAGAATAACAGAGACACTGCATTCATAAAGTC
TATGCTGAAGACCTTTACAAGATCAAAGTATACTTCACATGCAAAACCCT
GAGCAGCTTTTCACATTCTGGTGAATGGCCCTATACCTATGTCCATACTG
GGAGCCCTGAGAGAACTTAGTGAGTTAAAAAAAAATAGTACAATGACAGG
AGTCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGAGCCTGACAAATAC
AGATGCAGATGCTCACAACCAACCATTGGACTGAGCACAGGAACCCCCAA
TGGATCAGTTATGGAAAGGAATGAAGGAGCTGAATGGTTTTTCCACCCCA
TAGGAAGAACAACATTATCAACTAACCAGACTCTTTCTAGTTCTCAGGGA
CTAATCCATCAAACCATAAAATACTCTTGGAGGGAACCATGTCTCCCGTC
TCATATGTTACATAAGATCTCCTTGTTGTGTATCCACGGTAATAAAAGTT
CCTTGCTCCTGTTTATTTCCTAATTCCCCTTAGTTTTGTATTTCCTTTTT
CTTTATTATTCTTTCTCTTTCTTCTTATTTCTCTTTTTTCTTTTCTTATT
TCTTCTTTCCTTTTTTTTTCTCTTTTCTTTTCTGTCTTTTTTTTTTTTAT
TTTTCTTTCTTTTTTTCTTTTTCTTTCTTTTTTTTCTTTTTTTTTTCTTT
CTCTTTTCTTCTTTTTTCTTTCTCTTTTGTTTTTTTTTTTTTTTTTTTTT
TTCTTTATCTTTCTTTCCTTTTCTTTTTTCTTTTTTATTTTTTTCTTTCT
TTTTTTTCTATCTTTCTTATTCTTTTTATTT
| CCGTCTTTANTAAACGATGGAGGCTGGGGCGCCXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXGCCATTAGGGCCCTCNNNNNNGANNNCCAG
AGAGNNNANNCCCCTTAAAACCCCTCACACNCANAGAGNCNGAGAGAAAG
AAGGAGCTGAGAGCTGAGGAGNAGANGGACAACGGGCANACNANGGANCC
NNCCANANNNNNNGAACAAAACAANNAANAAGGGNAGCTCAGAAGGAAAA
GGAGACCAGGCCNCNAAAAGAAAAGACAGGNCNACGGGGACNAGCCACCA
CANCNAGGCANCNGGANGGGNNANAGNNNTCTGTATTGGNCTCTGTCTTT
TGAAAAAAAAAAGTGTCTTCTGGATGAGTAGTTAGGAATTATCTGGGGGT
ATTTTTTTTAATGNNNAGAANGCAGNNAGGGANGGNGNNGNNACAGAACC
CCCCCAGNNGNAGGCCCCCCCGACNNCACNAGGNCCAGAGGGAAGGAAAG
GCNCCCAGNACCAGGCANCGNNNCCCNAAGGGNGAGGGNCNNAAGNCCAA
CGGAAGAGCGGNGGGNNACGGCNAAGGCAGGNGCNCNACNANGGCACCNN
AAGGGNNANAGCACCAGGCAGNCANNCAGGNGANNCAAAGGCNNCAGGNC
AGAAGGAGGCNGCCAACCCAAGAAAGANAGCAAGAAACCAAACAAAAAAG
AAAAAGCAAGNAAACAAGGAAAAAGGAAAAGAAAACAANACCAAACCAGA
AGGAAACAGAGAACAGGAGGAAGAAAGGAAAATAAAANACAAAAAAGGGA
AAAAGGAAAAAAAAAGAGGAAGGAAAAAGAGGGGAAAGAGGAAAGGGAAA
AGAGAAAAAAAGAGAAAAGAAGAGAAAAGAAGAGGAGAAGAAAGAGAAAG
AANAAGAAGAGAAGGAAGGAAGAGAAGGAGAAAAGAAAAAACAGAAGAAA
AGAAAGAGAAAAAAAGACAAAAAGAGAAAGGAAACAGAGANAAAAAGAAA
AGGAAAAAACAAAAAAAAAAGAAGACAGAAACAGGCGAAACACAACAGCA
GAGAAAGAAAAAAAGAGAGACAAAGAAAAGAGCGAAACAAGACAAGAAAA
AAGGAGAAAGAACAAAAAAAAAGAAAGCGGACGACGGAAAAAAGAGACAG
AGAACGAGCGAGAGAGAAAAAGCAAAAAAAAGAGAAAAAAACAAGCAAAC
GAAGC
|
quality values | Open.Hide. 0 3 8 11 8 9 9 3 0 0 0 0 0 0 3 9 7 7 8 7 8 8 10 9 8 8 8 8 8 8 17 19 8 8 8 8 8 8 21 21 28 24 28 28 29 34 43 44 53 50
50 50 53 53 53 47 43 53 53 53 42 42 38 38 36 36 33 31 31 33 33 21 18 11 9 9 9 9 8 8 9 9 15 15 28 21 19 16 19 17 21 30 35 36 42 53 53 53 53 53
53 53 53 57 53 53 50 50 31 30 28 21 21 10 8 8 8 8 10 8 22 26 33 25 30 25 28 28 30 21 21 8 7 7 8 8 8 12 12 22 33 59 37 39 44 44 36 36 53 53
53 53 50 50 43 43 47 47 47 53 53 53 47 42 42 42 42 42 42 47 47 47 47 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 68 68 68 68 68 68
68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57
57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 59 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68
68 68 68 68 57 57 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 57 57 48 57 54 57 44 44 35 42 44 57 57 57 57 57 57 57 57 57
57 57 57 57 57 57 57 57 59 59 59 59 43 43 43 43 43 48 48 57 59 57 54 54 59 59 59 59 59 48 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 53 53 59 59 59
59 59 32 34 22 19 12 12 12 24 12 12 11 15 23 30 59 59 50 50 50 53 53 57 59 48 48 48 57 57 57 43 43 43 43 43 43 43 43 43 59 54 54 54 59 59 59 59 59 59
44 40 43 43 48 43 37 36 36 36 41 46 46 57 59 59 44 32 30 30 32 42 42 46 46 48 59 59 68 68 68 68 68 68 59 59 59 59 59 59 59 46 43 43 44 50 50 54 57 57
57 57 47 47 47 47 48 59 59 68 68 68 68 68 59 59 52 43 43 44 44 52 52 57 57 57 57 50 50 41 50 50 59 59 54 54 54 59 57 68 68 68 68 68 68 68 68 68 59 57
57 50 50 43 43 48 57 43 43 28 28 28 43 43 57 57 43 43 31 31 31 44 44 54 54 57 57 57 59 54 54 54 59 59 59 59 42 37 37 39 42 37 43 42 44 36 28 28 37 44
40 40 28 36 37 42 39 39 37 43 40 39 41 37 37 43 43 43 59 57 48 48 43 43 30 39 36 43 43 57 47 47 37 33 28 28 28 37 28 32 37 34 32 23 20 20 28 34 32 30
30 37 37 37 30 26 17 17 19 27 31 30 30 22 24 25 28 28 32 28 28 28 37 37 37 27 24 12 12 11 12 12 23 12 14 14 26 26 36 37 34 26 22 28 28 28 28 22 16 15
10 10 10 10 19 23 17 10 10 10 17 17 18 19 24 33 28 20 13 10 10 10 18 18 18 18 13 17 11 11 11 13 11 10 10 8 8 8 8 8 8 13 8 8 8 11 14 13 10 10
11 11 11 10 10 10 10 10 11 15 19 9 8 8 8 8 10 10 11 10 10 10 20 15 16 17 13 13 10 9 9 9 12 10 7 7 6 8 8 6 6 8 10 10 14 12 12 10 6 8
6 6 8 8 9 8 8 8 8 8 10 10 8 8 10 8 8 8 8 10 10 10 10 8 8 8 8 9 9 9 13 10 9 9 9 10 10 10 10 10 15 10 9 9 9 9 9 12 12 15
15 11 11 9 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 8 10 17 21 13 12 12 12 8 7 7 7 8 8 10 8 8 8 8 8 8 8 10 10 18 10 9 9 8 8 6
6 8 8 8 6 6 6 8 8 10 10 13 14 11 11 11 11 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 6 7 7 8 8 8 8 10 9 9 8 8 8 8 8 15 11 9
8 13 11 11 8 8 8 13 12 8 9 10 9 9 8 8 8 8 11 10 8 9 9 9 10 12 12 11 12 11 11 11 11 10 10 12 10 15 12 9 9 9 10 10 8 8 8 6 6 10
15 8 8 8 8 9 10 8 7 7 8 11 13 17 12 11 10 8 8 8 8 6 6 8 12 10 8 9 12 8 8 6 6 6 8 8 8 13 8 8 11 11 18 18 24 22 17 13 13 13
10 8 8 9 8 6 12 7 7 8 12 14 17 13 11 9 9 12 13 15 13 9 9 9 11 11 9 9 10 12 12 9 8 8 6 7 9 9 12 12 21 15 8 8 8 12 8 8 15 8
10 10 9 9 9 15 11 8 8 8 8 8 10 10 10 11 7 7 11 13 6 6 8 8 9 8 13 9 9 9 12 16 10 10 9 9 9 9 11 13 16 11 8 8 8 8 12 12 14 12
12 11 11 10 8 8 6 6 8 8 10 10 11 10 9 8 8 6 7 10 10 9 10 9 13 13 15 11 10 10 8 8 8 8 8 11 11 14 20 16 14 11 10 9 8 8 8 8 8 8
10 10 19 13 10 8 10 6 6 8 6 9 13 12 21 11 8 7 7 7 8 11 11 12 10 12 10 10 10 13 11 | Open.Hide. 8 8 8 8 9 9 9 8 3 0 3 17 6 6 6 7 7 7 6 6 6 6 6 8 6 6 6 6 8 10 15 9 7 9 9 16 10 19 19 22 8 9 10 19 19 29 22 28 15 19
8 8 8 23 23 31 28 30 28 30 33 21 23 3 0 0 0 3 7 6 6 6 6 6 6 8 6 8 7 8 8 8 8 9 3 0 0 0 0 0 0 3 3 0 0 0 3 23 23 37
37 23 23 3 0 0 0 3 0 0 3 7 7 7 8 6 8 8 8 8 11 8 8 8 8 7 7 7 17 3 0 3 3 0 3 23 23 3 0 3 0 3 27 27 44 47 47 59 59 24
19 9 9 9 9 24 39 39 41 42 59 47 41 39 37 37 37 39 27 27 3 0 3 29 3 0 3 25 25 39 24 24 9 9 9 7 8 3 0 3 3 0 3 0 3 7 3 0 3 3
0 0 3 27 3 0 3 0 0 0 0 0 0 3 27 29 44 47 47 47 44 25 25 3 0 0 3 3 0 3 14 7 7 3 0 3 18 23 37 37 19 9 9 9 9 24 24 24 24 9
9 9 9 19 59 24 22 9 9 7 7 3 0 3 0 3 29 27 59 59 59 59 59 59 47 44 19 7 7 3 0 3 0 3 7 7 9 9 14 27 3 0 3 27 27 44 47 47 47 27
29 3 0 3 0 3 7 7 7 3 0 3 0 3 7 3 0 3 7 3 0 0 3 0 3 3 0 0 0 3 16 11 9 7 7 7 10 17 3 0 3 25 25 39 41 42 50 50 50 59
59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 50 53 50 50 50 50 53 53 53 57 59 59 59 59 50 50 50 47 47 47 59 19 9 9 9 9 15 21 11
12 11 14 15 19 19 16 16 9 9 9 9 3 0 0 0 3 27 27 3 0 3 29 29 3 0 0 3 29 27 18 3 0 3 3 0 3 0 0 3 0 0 3 11 13 11 9 9 12 9
11 12 10 11 9 11 3 0 0 3 0 3 6 6 6 6 6 6 17 11 14 17 15 3 0 0 3 25 3 0 3 27 3 0 3 7 14 19 9 9 9 6 8 9 10 10 10 13 10 10
8 3 0 3 7 14 17 3 0 3 27 27 43 43 22 22 3 0 3 3 0 0 0 3 7 3 0 3 7 7 7 3 0 3 27 27 27 3 0 3 0 0 3 23 3 0 3 21 15 14
9 9 9 9 16 39 19 19 7 7 3 0 3 7 3 0 0 3 7 7 7 3 0 3 7 7 9 9 7 7 3 0 3 3 0 3 0 3 3 0 3 0 3 7 7 17 27 3 0 0
3 11 23 23 3 0 0 3 0 3 17 19 9 8 8 9 9 9 7 15 3 0 3 3 0 0 3 7 7 3 0 3 3 0 0 3 8 8 8 15 11 3 0 0 3 7 7 3 0 3
7 7 7 7 8 15 6 6 7 3 0 3 8 8 8 8 6 7 8 6 6 6 8 8 13 7 3 0 3 9 12 9 9 9 9 9 9 11 8 6 6 6 6 8 8 6 7 7 9 10
9 12 9 9 10 10 7 7 7 3 0 3 9 12 8 8 8 8 8 8 8 12 14 12 18 9 9 8 8 6 8 10 10 9 9 9 9 3 0 3 8 6 6 6 6 8 8 8 8 8
13 13 9 9 9 9 8 8 8 9 10 8 6 6 6 6 6 6 6 6 8 9 16 11 11 11 11 11 9 9 9 9 3 3 3 9 3 0 3 7 6 8 8 10 17 10 13 13 10 11
10 10 10 10 11 11 20 20 34 34 30 30 16 10 8 6 6 8 8 8 9 8 8 19 19 19 15 9 8 8 13 10 10 9 9 9 10 9 9 9 9 12 12 11 11 11 9 14 21 9
8 8 8 8 15 15 9 9 10 19 10 9 9 9 9 9 9 9 16 14 9 9 9 9 9 9 9 9 9 9 10 10 10 14 8 8 8 8 10 13 12 10 10 10 13 12 9 8 8 6
6 3 0 3 8 8 8 11 8 10 12 8 8 8 8 8 9 10 10 22 13 13 9 8 8 8 6 6 6 6 8 8 9 8 8 8 8 8 8 13 9 9 11 9 8 8 6 6 8 8
10 10 13 12 8 6 6 10 8 12 11 18 19 16 13 8 8 7 7 13 8 11 11 8 11 7 6 8 8 10 14 10 8 8 6 6 8 8 8 3 0 3 13 9 8 8 6 6 8 8
11 8 6 6 8 8 8 9 10 12 12 14 13 11 10 10 17 10 10 10 10 8 8 8 6 8 6 6 10 8 8 8 8 8 9 9 9 8 8 8 8 10 8 8 8 8 9 9 9 9
9 12 11 10 11 9 8 6 6 6 6 8 10 10 8 8 8 8 8 8 10 8 8 8 15 8 8 8 8 8 8 8 10 12 8 8 6 7 8 8 8 8 8 6 8 6 7 8 10 11
10 10 8 8 8 8 8 8 10 19 8 8 8 8 8 8 13 13 11 12 11 9 9 9 9 6 6 6 6 6 6 8 8 8 8 6 6 8 8 6 7 15 6 9 8 8 8 8 6 6
9 9 11 8 8 8 8 8 8 8 8 6 6 8 6 6 8 10 15 21 13 12 9 7 14 10 8 8 8 8 8 8 8 6 7 8 8 17 8 8 7 6 8 8 8 6 7 8 8 6
6 8 8 8 6 |