Query= MSMg01no143_b08.b1 MSMg01no143_b08.b1 CHROMAT_FILE:
MSMg01no143_b08.b1 PHD_FILE: MSMg01no143_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:32 2005
(662 letters)
>mm_chr12_104280219_104281278
Length = 1060
Score = 1205 bits (623), Expect = 0.0
Identities = 646/655 (98%), Gaps = 4/655 (0%)
Strand = Plus / Minus
Query: 9 gaattcagtctgtc-caaaagcaaggggaaaaaaataactgaagaaacctgtaacaggca 67
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gaattcagtctgtcataaaagcaaggggaaaaaaataactgaagaaacctgtaacaggca 801
Query: 68 aaaaagaaggaaggaaaacaaaagcaggagggggccttggacgcctagcctatgctgtga 127
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 800 aaaaagaaggaaggaaaacaaaagcaggagggggccttggacgcctagcc---gctgtga 744
Query: 128 gaagcgactgactaactccacgtaccacgtgacctgccatgtgcttacggcaacaccctc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaagcgactgactaactccacgtaccacgtgacctgccatgtgcttacggcaacaccctc 684
Query: 188 acgccaaagaaaagaccttgaaccccacatcttctaaagttcagaatggggttatgtgag 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 acgccaaagaaaagaccttgaaccccacatcttctaaagttcagaatggggttatgtgag 624
Query: 248 aaaatgcgcagtgcaaagcctgcgcttctgtccctggctcactcacatctgttctttatc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 623 aaaatgcgcagtgcaaagcctgcgcttctgtccctggctcactcacatctgttctttctc 564
Query: 308 tggagccaaggtgtctatgtcttacggttcgaagttgcacagtcctatcacagactctag 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tggagccaaggtgtctatgtcttacggttcgaagttgcacagtcctatcacagactctag 504
Query: 368 gacgtgaccagcagagaggggaggattcccaaatgtattggctcagacagaagccagtta 427
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 503 gacgtgatcagcagagaggggaggatccccaaatgtattggctcagacagaagccagtta 444
Query: 428 aagacaagtccgtcagttaaagatgtgtttgtcgggattcttcggacaattagctcaatg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aagacaagtccgtcagttaaagatgtgtttgtcgggattcttcggacaattagctcaatg 384
Query: 488 ccttacaggccttggctgtgaactcacagcccaaactcacagagaccactgttgctctta 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ccttacaggccttggctgtgaactcacagcccaaactcacagagaccactgttgctctta 324
Query: 548 gccaaatactgtcccttctacattgaacccggaagtgcttgagacagacggcagagctct 607
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gccaaatactgtcccttcaacattgaacccggaagtgcttgagacagacggcagagctct 264
Query: 608 gctttacagagatgcatgcaactcgctccttcactgagcaggttactaactgaga 662
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gctttacagagatgcatgcaactcgctccttcactgagcaggttactaactgaga 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1060
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1050
Effective search space: 684600
Effective search space used: 684600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_b08.g1 MSMg01no143_b08.g1 CHROMAT_FILE:
MSMg01no143_b08.g1 PHD_FILE: MSMg01no143_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:03:32 2005
(434 letters)
>mm_chr12_104126417_104127250
Length = 834
Score = 808 bits (418), Expect = 0.0
Identities = 430/434 (99%)
Strand = Plus / Plus
Query: 1 gcatccttctactttatccttcttattacctgggaatgccggtgcaggctgctgtcccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatccttctactttatccttcttattacctgggaatgccggtgcaggctgctgtcccca 260
Query: 61 gcatcagtgaggacggagagctgagtggagatggaggcggagaggatcaaaatcagcagg 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcatcagtgaggacagagagctgagtggagatggaggcggagaggatcaaaatcagcagg 320
Query: 121 cgaggggctggagaaaaggctcagggctggagagtacttttcctgcagaggacacaagtt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 cgaggggctggagaaaaggctcagggctggagagtacttttcctgcagaggacacaagat 380
Query: 181 cactttccagtgctcacctcaagaggctcacaactgcctgtaactctagctccaggggac 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 cactttccagtgctcacctcaagaggttcacaactgcctgtaactctagctccaggggac 440
Query: 241 ccgagtctctcccccacacaggtgcacatagaaacaaaggagttttagaaagacagaagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccgagtctctcccccacacaggtgcacatagaaacaaaggagttttagaaagacagaagc 500
Query: 301 tattacagaggaagagtggatctctaccaccctcactgacaacaagaaacaaaactgcgc 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattaaagaggaagagtggatctctaccaccctcactgacaacaagaaacaaaactgcgc 560
Query: 361 atgtgcagaagagcatgtgcagaagagcaagcgaagcgtatgcaaatgactctttaaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgtgcagaagagcatgtgcagaagagcaagcgaagcgtatgcaaatgactctttaaaag 620
Query: 421 gtcacaaggttcca 434
||||||||||||||
Sbjct: 621 gtcacaaggttcca 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
